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AT2G41380.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G61210.1); Has 1429 Blast hits to 1424 proteins in 497 species: Archae - 6; Bacteria - 922; Metazoa - 80; Fungi - 179; Plants - 160; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Protein Annotations
DNASU:818736eggNOG:ENOG4111IQHeggNOG:KOG3010EMBL:AC005662EMBL:AY072367EMBL:BT006307EMBL:CP002685
EnsemblPlants:AT2G41380EnsemblPlants:AT2G41380.1entrez:818736Gene3D:3.40.50.150GeneID:818736GO:GO:0005739GO:GO:0008168
GO:GO:0046686Gramene:AT2G41380.1hmmpanther:PTHR10108hmmpanther:PTHR10108:SF692HOGENOM:HOG000028565InterPro:IPR013216InterPro:IPR029063
KEGG:ath:AT2G41380OMA:CHDLAWDPfam:PF08241PhylomeDB:Q9ZVC3PIR:A84841Proteomes:UP000006548RefSeq:NP_181669.1
SMR:Q9ZVC3STRING:3702.AT2G41380.1SUPFAM:SSF53335TAIR:AT2G41380UniGene:At.43779UniProt:Q9ZVC3
Coordinates (TAIR10) chr2:+:17251981..17252886
Molecular Weight (calculated) 30559.10 Da
IEP (calculated) 5.11
GRAVY (calculated) -0.41
Length 269 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKLFIKQAE QYAAARPSYP TKLFEYIASK TPCHDLAWDV GAGSGQASRS LAGIYKNVIA TDTSSKQLEF AAKLPNVRYE ITPPTMSSSE IEKLVAPESS
101: VDLVTVAQAL HWFDLTNFYS NVKHVLKKPN GVIAAWCYTN PEVNDAVDKV FQRFYDEKLG PHWDLARRLV EDGYRGIEFP FEKVDNDEST ESQSFPVRFV
201: TEKEMVFEEY MTYLRSSSAY QTAKEKGLEL LTAEMEGEFA GSWKEDGKEK KVVRYPIYLL IGRVAEERV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)