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AT2G41370.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.500
nucleus 0.500
ASURE: cytosol,nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Ankyrin repeat family protein / BTB/POZ domain-containing protein
Curator
Summary (TAIR10)
Encodes BOP2, a cytoplasmic and nuclear-localized NPR1 like protein with BTB/POZ domain and ankyrin repeats. Interacts with BOP1 and appears to be genetically redundant with BOP1.bop1/bop2 double mutants have longer leaves, often with leaflets on the petiole, asymmetric flowers with extra organs and no nectaries. Also defective in floral organ abscission. BOP1/2 promotes floral meristem fate and determinacy in a pathway targetting APETALA1 and AGAMOUS-LIKE24. PUCHI, BOP1 and BOP2 are redundantly required for expression of LFY and AP1.
Computational
Description (TAIR10)
BLADE ON PETIOLE2 (BOP2); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Ankyrin repeat-containing domain (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein / BTB/POZ domain-containing protein (TAIR:AT3G57130.1); Has 6067 Blast hits to 4933 proteins in 392 species: Archae - 26; Bacteria - 465; Metazoa - 2734; Fungi - 296; Plants - 944; Viruses - 70; Other Eukaryotes - 1532 (source: NCBI BLink).
Protein Annotations
BioGrid:4072eggNOG:COG0666eggNOG:KOG0504EMBL:AC005662EMBL:AY928830EMBL:BT002986EMBL:BT015773
EMBL:CP002685EnsemblPlants:AT2G41370EnsemblPlants:AT2G41370.1entrez:818735Gene3D:1.25.40.20GeneID:818735Genevisible:Q9ZVC2
GO:GO:0005634GO:GO:0005737GO:GO:0009864GO:GO:0009944GO:GO:0009954GO:GO:0010227GO:GO:0010254
GO:GO:0010434GO:GO:0010582GO:GO:0016567GO:GO:0048439Gramene:AT2G41370.1hmmpanther:PTHR24413hmmpanther:PTHR24413:SF126
HOGENOM:HOG000234377InParanoid:Q9ZVC2IntAct:Q9ZVC2InterPro:IPR000210InterPro:IPR002110InterPro:IPR011333InterPro:IPR020683
InterPro:IPR024228iPTMnet:Q9ZVC2KEGG:ath:AT2G41370KO:K14508OMA:IFQPINNPaxDb:Q9ZVC2Pfam:PF00651
Pfam:PF11900Pfam:PF12796Pfam:Q9ZVC2Pfscan:PS50088Pfscan:PS50097Pfscan:PS50297PhylomeDB:Q9ZVC2
PIR:H84840PRIDE:Q9ZVC2PRO:PR:Q9ZVC2PROSITE:PS50088PROSITE:PS50097PROSITE:PS50297ProteinModelPortal:Q9ZVC2
Proteomes:UP000006548RefSeq:NP_181668.1SMART:SM00225SMART:SM00248SMR:Q9ZVC2STRING:3702.AT2G41370.1SUPFAM:SSF48403
SUPFAM:SSF54695TAIR:AT2G41370tair10-symbols:BOP2UniGene:At.43967UniPathway:UPA00143UniProt:Q9ZVC2
Coordinates (TAIR10) chr2:-:17238019..17240203
Molecular Weight (calculated) 54004.40 Da
IEP (calculated) 6.72
GRAVY (calculated) -0.28
Length 491 amino acids
Sequence (TAIR10)
(BLAST)
001: MSNLEESLRS LSLDFLNLLI NGQAFSDVTF SVEGRLVHAH RCILAARSLF FRKFFCGTDS PQPVTGIDPT QHGSVPASPT RGSTAPAGII PVNSVGYEVF
101: LLLLQFLYSG QVSIVPQKHE PRPNCGERGC WHTHCSAAVD LALDTLAASR YFGVEQLALL TQKQLASMVE KASIEDVMKV LIASRKQDMH QLWTTCSHLV
201: AKSGLPPEIL AKHLPIDVVT KIEELRLKSS IARRSLMPHN HHHDLSVAQD LEDQKIRRMR RALDSSDVEL VKLMVMGEGL NLDESLALHY AVESCSREVV
301: KALLELGAAD VNYPAGPAGK TPLHIAAEMV SPDMVAVLLD HHADPNVRTV GGITPLDILR TLTSDFLFKG AVPGLTHIEP NKLRLCLELV QSAAMVISRE
401: EGNNSNNQNN DNNTGIYPHM NEEHNSGSSG GSNNNLDSRL VYLNLGAGTG QMGPGRDQGD DHNSQREGMS RHHHHHQDPS TMYHHHHQHH F
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)