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AT2G41230.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.988
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:4059eggNOG:ENOG410JX0EeggNOG:ENOG41104EXEMBL:AC005662
EMBL:AY091149EMBL:BT020283EMBL:BT024631EMBL:CP002685
EnsemblPlants:AT2G41230EnsemblPlants:AT2G41230.1entrez:818722GeneID:818722
Genevisible:Q8RWS1GO:GO:0001558GO:GO:0005634GO:GO:0005783
GO:GO:0016021GO:GO:0048569GO:GO:0051302GO:GO:0071215
GO:GO:0071367GO:GO:0071369Gramene:AT2G41230.1HOGENOM:HOG000149122
InParanoid:Q8RWS1KEGG:ath:AT2G41230PaxDb:Q8RWS1Pfam:Q8RWS1
PIR:D84839PRO:PR:Q8RWS1ProteinModelPortal:Q8RWS1Proteomes:UP000006548
RefSeq:NP_850348.1STRING:3702.AT2G41230.1TAIR:AT2G41230TMHMM:TMhelix
UniGene:At.27982UniGene:At.68048UniProt:Q8RWS1
Coordinates (TAIR10) chr2:-:17195359..17195625
Molecular Weight (calculated) 9628.42 Da
IEP (calculated) 7.55
GRAVY (calculated) 0.87
Length 88 amino acids
Sequence (TAIR10)
(BLAST)
1: MRVHDQRLRF DVTPKPMGLN GSSLITARSV ALLLFLSLLL LILPPFLPPL PPPPATLLLL PLLLMILLIF LAFSPSNEPS LAVEPLDP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)