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AT2G41070.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Basic-leucine zipper (bZIP) transcription factor family protein
Curator
Summary (TAIR10)
Transcription factor homologous to ABI5. Regulates AtEm1 expression by binding directly at the AtEm1 promoter. Located in the nucleus and expressed during seed maturation in the cotyledons and later in the whole embryo.
Computational
Description (TAIR10)
ENHANCED EM LEVEL (EEL); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: ABA-responsive element binding protein 3 (TAIR:AT3G56850.1); Has 1927 Blast hits to 1817 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 464; Fungi - 7; Plants - 1379; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).
Protein Annotations
BioGrid:4043eggNOG:ENOG410JUQYeggNOG:ENOG41106MZEMBL:AC004261EMBL:AF334209EMBL:AJ420881EMBL:AK118113
EMBL:AY084668EMBL:BN000024EMBL:BT025175EMBL:CP002685EnsemblPlants:AT2G41070EnsemblPlants:AT2G41070.1EnsemblPlants:AT2G41070.2
EnsemblPlants:AT2G41070.3entrez:818706GeneID:818706Genevisible:Q9C5Q2GO:GO:0003677GO:GO:0003700GO:GO:0005634
GO:GO:0006351GO:GO:0009738GO:GO:0043565Gramene:AT2G41070.1Gramene:AT2G41070.2Gramene:AT2G41070.3hmmpanther:PTHR22952
hmmpanther:PTHR22952:SF205HOGENOM:HOG000237278InParanoid:Q9C5Q2IntAct:Q9C5Q2InterPro:IPR004827iPTMnet:Q9C5Q2KEGG:ath:AT2G41070
KO:K14432ncoils:CoilOMA:YPVCEMQPaxDb:Q9C5Q2Pfam:PF00170Pfam:Q9C5Q2Pfscan:PS50217
PhylomeDB:Q9C5Q2PIR:T02112PRIDE:Q9C5Q2PRO:PR:Q9C5Q2PROSITE:PS00036PROSITE:PS50217ProteinModelPortal:Q9C5Q2
Proteomes:UP000006548RefSeq:NP_565948.1RefSeq:NP_850341.1RefSeq:NP_973655.1scanprosite:PS00036SMART:SM00338SMR:Q9C5Q2
STRING:3702.AT2G41070.1SUPFAM:SSF57959TAIR:AT2G41070tair10-symbols:ATBZIP12tair10-symbols:DPBF4tair10-symbols:EELUniGene:At.21445
UniProt:Q9C5Q2
Coordinates (TAIR10) chr2:+:17131249..17132208
Molecular Weight (calculated) 29619.50 Da
IEP (calculated) 9.37
GRAVY (calculated) -0.79
Length 262 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSIRGNIEE PISQSLTRQN SLYSLKLHEV QTHLGSSGKP LGSMNLDELL KTVLPPAEEG LVRQGSLTLP RDLSKKTVDE VWRDIQQDKN GNGTSTTTTH
101: KQPTLGEITL EDLLLRAGVV TETVVPQENV VNIASNGQWV EYHHQPQQQQ GFMTYPVCEM QDMVMMGGLS DTPQAPGRKR VAGEIVEKTV ERRQKRMIKN
201: RESAARSRAR KQAYTHELEI KVSRLEEENE KLRRLKEVEK ILPSEPPPDP KWKLRRTNSA SL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)