AT2G40760.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.889 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Rhodanese/Cell cycle control phosphatase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Rhodanese/Cell cycle control phosphatase superfamily protein; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09280.1); Has 5729 Blast hits to 5726 proteins in 1464 species: Archae - 2; Bacteria - 2945; Metazoa - 57; Fungi - 3; Plants - 114; Viruses - 0; Other Eukaryotes - 2608 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:17010050..17011968 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52680.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.83 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.54 | ||||||||||||||||||||||||||||||||||||||||
| Length | 474 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLRFYHWRFP PSLAVVRMLS SPPPPHSHSP FSGGGVNSNS VGGNSKPELQ FPQSQPHKLS SSPSSSLKST VACSNAGAIR RSMATVSQAF SERTESIDSD 101: LGSLVVVSFY KFADFPEHAD FRKPLKDLCE KLRVSGGIIL APEGINGSIC GIRESVEEVL AFIQRDVRLN GLRQVETPVS PEQEAIHHGH SSSSPLAAGE 201: DAPFRWDHVR VKLKKEIVTL GIPSVSPIER VGTYVSPEEW NELISDPETV VIDVRNTYET RIGKFKGAVD PCTTAFRNFP SWVENQFALK QEGNETQAKV 301: EKEDFSEITH KEDKAEKPKT LPRIAMYCTG GIRCEKASSL LLSQGFEEVY HLKGGILKYL EEVPKTESLW EGECFVFDKR VSVEHGLAQG THKLCYGCKQ 401: PISDEDMEAP EYEYGVSCPY CYSKKSEEEK ERARARQTQF EEWGVIGGPD KGRRPATKPD SPRKKINAKL GSSI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)