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AT2G40760.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.897
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Rhodanese/Cell cycle control phosphatase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Rhodanese/Cell cycle control phosphatase superfamily protein; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09280.1); Has 5729 Blast hits to 5726 proteins in 1464 species: Archae - 2; Bacteria - 2945; Metazoa - 57; Fungi - 3; Plants - 114; Viruses - 0; Other Eukaryotes - 2608 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1054eggNOG:ENOG410IKN1EMBL:AK222157EMBL:BT025323EMBL:CP002685EnsemblPlants:AT2G40760EnsemblPlants:AT2G40760.1
entrez:818672Gene3D:3.40.250.10GeneID:818672Genevisible:Q1JPN0Gramene:AT2G40760.1HAMAP:MF_00469hmmpanther:PTHR22778
hmmpanther:PTHR22778:SF12HOGENOM:HOG000034808InParanoid:Q1JPN0InterPro:IPR001763InterPro:IPR020936iPTMnet:Q1JPN0KEGG:ath:AT2G40760
OMA:MEAPEYEPaxDb:Q1JPN0Pfam:PF00581Pfam:Q1JPN0Pfscan:PS50206PhylomeDB:Q1JPN0PRIDE:Q1JPN0
PRO:PR:Q1JPN0PROSITE:PS50206ProteinModelPortal:Q1JPN0Proteomes:UP000006548RefSeq:NP_565940.1SMART:SM00450SMR:Q1JPN0
STRING:3702.AT2G40760.1SUPFAM:SSF52821TAIR:AT2G40760UniGene:At.50128UniProt:Q1JPN0
Coordinates (TAIR10) chr2:+:17010050..17011968
Molecular Weight (calculated) 52680.20 Da
IEP (calculated) 6.83
GRAVY (calculated) -0.54
Length 474 amino acids
Sequence (TAIR10)
(BLAST)
001: MLRFYHWRFP PSLAVVRMLS SPPPPHSHSP FSGGGVNSNS VGGNSKPELQ FPQSQPHKLS SSPSSSLKST VACSNAGAIR RSMATVSQAF SERTESIDSD
101: LGSLVVVSFY KFADFPEHAD FRKPLKDLCE KLRVSGGIIL APEGINGSIC GIRESVEEVL AFIQRDVRLN GLRQVETPVS PEQEAIHHGH SSSSPLAAGE
201: DAPFRWDHVR VKLKKEIVTL GIPSVSPIER VGTYVSPEEW NELISDPETV VIDVRNTYET RIGKFKGAVD PCTTAFRNFP SWVENQFALK QEGNETQAKV
301: EKEDFSEITH KEDKAEKPKT LPRIAMYCTG GIRCEKASSL LLSQGFEEVY HLKGGILKYL EEVPKTESLW EGECFVFDKR VSVEHGLAQG THKLCYGCKQ
401: PISDEDMEAP EYEYGVSCPY CYSKKSEEEK ERARARQTQF EEWGVIGGPD KGRRPATKPD SPRKKINAKL GSSI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)