AT2G40600.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : appr-1-p processing enzyme family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
appr-1-p processing enzyme family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Appr-1-p processing (InterPro:IPR002589); BEST Arabidopsis thaliana protein match is: appr-1-p processing enzyme family protein (TAIR:AT1G69340.1); Has 3775 Blast hits to 3643 proteins in 1376 species: Archae - 162; Bacteria - 2045; Metazoa - 672; Fungi - 129; Plants - 171; Viruses - 376; Other Eukaryotes - 220 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr2:-:16947012..16948537 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 27479.40 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.47 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.07 | ||||||||||||||||||||||||||||
| Length | 257 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRRQWLTSGL SSLPGLLHSS STILRPTSSS SSRASLISFA VNNFHTIASS SSTLSSRLTT VSSSMASGDE GAVFNLSDSS LLKILKGDIT KWSVDSSSDA 101: IVNPANERML GGGGADGAIH RAAGPQLRAA CYEVPEVRPG VRCPTGEARI TPGFNLPASR VIHTVGPIYD SDVNPQESLT NSYKNSLRVA KENNIKYIAF 201: PAISCGIYGY PFDEAAAIGI STIKQFSTDF KEVHFVLFAD DIFSVWVNKA KEVLQKA |
||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)