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AT2G40300.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ferritin 4
Curator
Summary (TAIR10)
Encodes FERRITIN 4, AtFER4. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool. Localize to mitochondria. Knock out mutants are not sensitive to abiotic stress.
Computational
Description (TAIR10)
ferritin 4 (FER4); FUNCTIONS IN: oxidoreductase activity, ferric iron binding, binding, transition metal ion binding; INVOLVED IN: in 8 processes; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferritin, N-terminal (InterPro:IPR001519), Ferritin-related (InterPro:IPR012347), Ferritin-like (InterPro:IPR009040), Ferritin, conserved site (InterPro:IPR014034), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Ferritin/Dps protein (InterPro:IPR008331); BEST Arabidopsis thaliana protein match is: ferritin 3 (TAIR:AT3G56090.1); Has 4634 Blast hits to 4632 proteins in 1342 species: Archae - 173; Bacteria - 2136; Metazoa - 1697; Fungi - 13; Plants - 350; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G40300-MONOMERBioGrid:3960EC:1.16.3.1eggNOG:COG1528eggNOG:KOG2332EMBL:AC007020EMBL:AF085279
EMBL:AJ312191EMBL:AY062795EMBL:AY081615EMBL:CP002685EnsemblPlants:AT2G40300EnsemblPlants:AT2G40300.1entrez:818622
Gene3D:1.20.1260.10GeneID:818622Genevisible:Q9S756GO:GO:0000302GO:GO:0004322GO:GO:0005739GO:GO:0006826
GO:GO:0006879GO:GO:0008199GO:GO:0009507GO:GO:0009570GO:GO:0009908GO:GO:0009941GO:GO:0010039
GO:GO:0015979GO:GO:0048366GO:GO:0055072Gramene:AT2G40300.1hmmpanther:PTHR11431hmmpanther:PTHR11431:SF41HOGENOM:HOG000223383
InParanoid:Q9S756InterPro:IPR001519InterPro:IPR008331InterPro:IPR009040InterPro:IPR009078InterPro:IPR012347InterPro:IPR014034
KEGG:ath:AT2G40300KO:K00522OMA:FNQMLLEPANTHER:PTHR11431PaxDb:Q9S756Pfam:PF00210Pfam:Q9S756
Pfscan:PS50905PhylomeDB:Q9S756PIR:G84827PRIDE:Q9S756PRO:PR:Q9S756PROSITE:PS00204PROSITE:PS00540
PROSITE:PS50905ProteinModelPortal:Q9S756Proteomes:UP000006548Reactome:R-ATH-917937RefSeq:NP_181559.1scanprosite:PS00204scanprosite:PS00540
SMR:Q9S756STRING:3702.AT2G40300.1SUPFAM:SSF47240TAIR:AT2G40300tair10-symbols:ATFER4tair10-symbols:FER4UniGene:At.27228
UniGene:At.69019UniProt:Q9S756
Coordinates (TAIR10) chr2:-:16831501..16833214
Molecular Weight (calculated) 29030.60 Da
IEP (calculated) 6.61
GRAVY (calculated) -0.27
Length 259 amino acids
Sequence (TAIR10)
(BLAST)
001: MLLKTVSSSS SSALSLVNFH GVKKDVSPLL PSISSNLRVS SGKSGNLTFS FRASKSSTTD ALSGVVFEPF KEVKKELDLV PTSSHLSLAR QKYSDECEAA
101: INEQINVEYN VSYVYHAMYA YFDRDNIALK GLAKFFKESS LEEREHAEKL MEYQNKRGGR VKLQSIVMPL SEFEHVDKGD ALYGMELALS LEKLVNEKLL
201: NLHSVASKNN DVHLADFIES EFLTEQVEAI KLISEYVAQL RRVGKGHGTW HFNQMLLEG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)