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AT2G40270.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT3G56050.2); Has 40621 Blast hits to 40281 proteins in 1597 species: Archae - 8; Bacteria - 2197; Metazoa - 11172; Fungi - 1041; Plants - 22757; Viruses - 129; Other Eukaryotes - 3317 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G40270-MONOMERBioGrid:3957eggNOG:COG0515eggNOG:KOG1187EMBL:AC007020EMBL:AF085279EMBL:AY091778
EMBL:AY149959EMBL:BX820203EMBL:CP002685EnsemblPlants:AT2G40270EnsemblPlants:AT2G40270.1entrez:818619ExpressionAtlas:Q9SIZ4
GeneID:818619Genevisible:Q9SIZ4GO:GO:0004672GO:GO:0005524GO:GO:0005886GO:GO:0016021hmmpanther:PTHR27001
hmmpanther:PTHR27001:SF131HOGENOM:HOG000240929InParanoid:Q9SIZ4InterPro:IPR000719InterPro:IPR001245InterPro:IPR011009iPTMnet:Q9SIZ4
KEGG:ath:AT2G40270OMA:YCEEAHPPaxDb:Q9SIZ4Pfam:PF07714Pfam:Q9SIZ4Pfscan:PS50011Pfscan:PS51257
PhylomeDB:Q9SIZ4PIR:D84827PRO:PR:Q9SIZ4PROSITE:PS50011ProteinModelPortal:Q9SIZ4Proteomes:UP000006548RefSeq:NP_565925.1
SMR:Q9SIZ4STRING:3702.AT2G40270.1SUPFAM:SSF56112TAIR:AT2G40270TMHMM:TMhelixUniGene:At.43577UniProt:Q9SIZ4
Coordinates (TAIR10) chr2:-:16822136..16824327
Molecular Weight (calculated) 54178.60 Da
IEP (calculated) 6.79
GRAVY (calculated) -0.21
Length 489 amino acids
Sequence (TAIR10)
(BLAST)
001: MLFKMRSFVA FVLLLSWFGS CCSLKDQAVD FLKSEDSLKK DLSSDEDSTY LKAFGFHRKT LVRNPYKDLP SRKDRKNRVV AATTTPSSSP EPAPKHVSTK
101: ASTVSEPQKR SSTQDVSPSP SAPLANSPIP RNSHSSVPLV VGCVGGAFFL LLVATGLYFF TSKAGKTVNP WRTGLSGQLQ KVFVTGIPVL KRSEIEAACE
201: DFSNVIGSCP IGKLFKGTLS SGVEIAVASF ATTTAKDWKD STEIHFRKKI EMLSKINHKN FANLLGYCEE KEPFTRILIF EYAPNGSLFE HLHYKESEHL
301: DWGMRLRIAM GLAYCLDHMH QLNPPIAHTN LVSSSLQLTE DYAVKVSDFS FGSSETETNI NNNTVIDTHI SALNPEDNIY SFGLLLFEMI TGKLIESVNK
401: PDSVDSSLVD FLRGETLAKM VDPTLESYDA KIENIGEVIK SCLRTDPKER PTMQEVTGWL REITGLSPND ATPKLSPLWW AELEVLSTA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)