AT2G40120.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.983 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G73460.1); Has 88242 Blast hits to 86864 proteins in 3207 species: Archae - 89; Bacteria - 10122; Metazoa - 34089; Fungi - 11944; Plants - 14453; Viruses - 383; Other Eukaryotes - 17162 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:16755137..16757258 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 64918.70 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.25 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.36 | ||||||||||||||||||||||||||||||||||||||||
| Length | 570 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAVDVKSVLE FLRRNGLTEA ESALRDDINE KNKLASFDFE KFLFPIPTPI KITASSRPSD SGGDGSNSKS SSSDDEFVSL DSSTSGFCSS SGFVNPYGDS 101: SSSSDGQSQF GTARTYPEWS EFYLHNETED EDEFMSPAFR ESDCFILPEN AEDKFITDNQ FENSLGVYDR SSSQGSLTEA SLDYLDKPFL LDIGLEDKTD 201: ELDLKTGDQL NVTDEEVDVV HEVEDEYEVF NLRIIHWKNR TGFEENKDLP IVINTVIGGR YYITEYIGSA AFSKVVQAQD LHNGVDVCLK IIKNDKDFFD 301: QSLDEIKLLK HVNKHDPADE HHILRLYDYF YHQEHLFIVC ELLRANLYEF QKFNQESGGE PYFNLSRLQV ITRQCLDALV FLHGLGIIHC DLKPENILIK 401: SYKRCAVKII DLGSSCFRSD NLCLYVQSRS YRAPEVILGL PYDEKIDLWS LGCILAELCS GEVLFPNEAV AMILARIVAV LGPIETEMLE KGQETHKYFT 501: KEYDLYHLNE ESNEIEYIIT EESSLEEQLQ VSDELFLDFV RTLLDINPLR RPTALEALNH PWLSSSSSYN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)