AT2G40090.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ABC2 homolog 9 | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of ATH subfamily | ||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ABC2 homolog 9 (ATH9); CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G65950.1); Has 9031 Blast hits to 8998 proteins in 1777 species: Archae - 124; Bacteria - 4320; Metazoa - 397; Fungi - 498; Plants - 701; Viruses - 9; Other Eukaryotes - 2982 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:16737685..16740303 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60921.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.36 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||
| Length | 538 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAARSLWRTR TKLLVVGTAL CGGSGAAFIA SSDDPSTTLK LCTSIPVRLY RNTVTAASIA FDYEYSLLGL AEGSSERAKV KHEVHLRSAQ KLQELCFKNG 101: GIYIKLGQHI GQLEYLVPEE YVRTMRESML NKCPISSYEQ VCEVFKKEVG EMPDQVFAEF DPVPIASASL AQVHVARTHD GKKVAVKVQH AHMTDTAAAD 201: TAAVGVLVNT LHRIFPSFDY RWLLDEMSES LPKELDFLVE AKNNEKCLDN FRKLSPHIAE YVYAPTIYWN LSTSKLLTME FMDGAQVNDV DKIRKLGIQP 301: YEVSKLVSQT FAEMMFKHGF VHCDPHAANL IVRPDPSGKR NIYGKRKPQL VILDHGLYKE LDFNTRFNYA SLWKALVFSD AKAIKEHSEK LGAGDDLYVL 401: FAGILTMRPW KQVIDTSVDH LVIQGNKEDV SELQMYASQY FSEISELLRR LPRVILLMLK TNDCLRSVNN ELMQGSSLES FLIIGKVSSQ AVLEAKRAEK 501: KSLMKWLKVW FEGFSVEARL WVMQFALWIL QVRKSLTL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)