suba logo
AT2G39850.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Subtilisin-like serine endopeptidase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT3G46850.1); Has 4351 Blast hits to 3901 proteins in 675 species: Archae - 80; Bacteria - 1999; Metazoa - 45; Fungi - 97; Plants - 1948; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G39850-MONOMEREC:3.4.21.-eggNOG:COG1404EMBL:AC003000
EMBL:CP002685EnsemblPlants:AT2G39850EnsemblPlants:AT2G39850.1entrez:818572
Gene3D:3.40.50.200GeneID:818572GO:GO:0004252GO:GO:0005576
GO:GO:0009505Gramene:AT2G39850.1hmmpanther:PTHR10795hmmpanther:PTHR10795:SF385
HOGENOM:HOG000238262InParanoid:F4IG09InterPro:IPR000209InterPro:IPR010259
InterPro:IPR015500InterPro:IPR022398InterPro:IPR023828iPTMnet:F4IG09
KEGG:ath:AT2G39850MEROPS:S08.A46OMA:CENITCNPANTHER:PTHR10795
Pfam:PF00082Pfam:PF05922PRIDE:F4IG09PRINTS:PR00723
PROSITE:PS00137PROSITE:PS00138ProteinModelPortal:F4IG09Proteomes:UP000006548
RefSeq:NP_565915.2scanprosite:PS00137scanprosite:PS00138SMR:F4IG09
STRING:3702.AT2G39850.1SUPFAM:SSF52743TAIR:AT2G39850UniGene:At.14661
UniProt:F4IG09
Coordinates (TAIR10) chr2:+:16630626..16634100
Molecular Weight (calculated) 87924.10 Da
IEP (calculated) 7.77
GRAVY (calculated) -0.50
Length 775 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIAFHTFLL QLLLFFFASF AEANDSRKTY LVQMKVGGHR YGSSSGHQEL LGEVLDDDST LADAFIYSYK ESFTGFSASL TPRERQKLMR RREVLEVSRS
101: RNLKLQTTRS WDFMNLTLKA ERNPENESDL VVAVIDSGIW PYSELFGSDS PPPPGWENKC ENITCNNKIV GARSYYPKKE KYKWVEEKSV IDVTGHGTHV
201: ASIVAGRKVE KAGYFGLAEG TMRGGVPNAK IAVYKTCWRV IRKNGREDSV CREDNILKAI DDAIADKVDI ISYSQGFQFT PLQKDKVSWA FLRALKNGIL
301: TSAAAGNYAN NGKFYYTVAN GAPWVMTVAA SLKDRIFETK LELEGEDKPI IVYDTINTFE TQDSFYPLLN EKAPPESTRK RELIAERNGY SILSNYDEKD
401: KGKDVFFEFA QINLLDEAIK EREKGAIVLG GKSYDFNESI KLQFPIASIF LDEQKKGKLW DYYKKDQSKE RLAKIHKTEE IPREEGWVPT VAHLSSRGPN
501: CDSFLANILK PDIAAPGLDI IAGWPENVKL SSDRPANDYR HLRFNIMSGT SMACPHATGL ALYLKSFKRW SPSAIKSALM TTSSEMTDDD NEFAYGSGHL
601: NATKVRDPGL VYETHYQDYI DYLCKLGYNT EKLRSHVGSD KIDCSKTEID HDADLNYPTM TARVPLPLDT PFKKVFHRTV TNVNDGEFTY LREINYRGDK
701: DFDEIIVDPP QLKFSELGET KTFTVTVTGI SKRNWNKNRA FMTRNTWLTW TEKDGSRQVR SPIVIYSIKG PKACM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)