AT2G39110.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.493 plasma membrane 0.383 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09830.2); Has 116486 Blast hits to 115184 proteins in 3894 species: Archae - 105; Bacteria - 13150; Metazoa - 42637; Fungi - 10037; Plants - 33183; Viruses - 432; Other Eukaryotes - 16942 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:16319770..16321568 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 48885.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.07 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||||||||||||||
| Length | 435 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNNSTSVKRL VSSKAMKCFY FSKDKTQDDE AKTRKFGSAT MARGGSGSEF NSDTSTATSI TSSLHVLSET HSNNLKVFVL DDLKTATKNF SRSLMIGEGG 101: FGGVFRGVIQ NPQDSRKKID IAVKQLSRRG LQGHKEWVTE VNVLGVVEHP NLVKLIGYCA EDDERGIQRL LVYEYVQNRS VQDHLSNRFI VTPLPWSTRL 201: KIAQDTARGL AYLHQGMEFQ IIFRDFKSSN ILLDENWNAK LSDFGLARMG PSDGITHVST AVVGTIGYAA PEYIQTGHLT AKSDVWSYGI FLYELITGRR 301: PFDRNRPRNE QNILEWIRPH LSDIKKFKMI IDPRLEGNYY LKSALKLAAV ANRCLMVKAK ARPTMSQVSE MLERIVETSS DGAPSGLPLM KSLTPKDAFE 401: ASRRERVKRR FVELLIGENG CPNLPTWSHK LVTSI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)