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AT2G38470.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : WRKY DNA-binding protein 33
Curator
Summary (TAIR10)
Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress.
Computational
Description (TAIR10)
WRKY DNA-binding protein 33 (WRKY33); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 4 (TAIR:AT1G13960.1); Has 7573 Blast hits to 4449 proteins in 326 species: Archae - 2; Bacteria - 120; Metazoa - 293; Fungi - 170; Plants - 5689; Viruses - 9; Other Eukaryotes - 1290 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IVG2eggNOG:ENOG4112BTFEMBL:BT033030EnsemblPlants:AT2G38470EnsemblPlants:AT2G38470.1entrez:818429ExpressionAtlas:B3DNP2
Gene3D:2.20.25.80GeneID:818429GO:GO:0003700GO:GO:0009408GO:GO:0043565Gramene:AT2G38470.1hmmpanther:PTHR31221
hmmpanther:PTHR31221:SF1InterPro:IPR003657KEGG:ath:AT2G38470KO:K13424OMA:GSGYATNPaxDb:B3DNP2Pfam:PF03106
Pfam:Q8S8P5Pfscan:PS50811PhylomeDB:B3DNP2PRIDE:B3DNP2PROSITE:PS50811ProteinModelPortal:B3DNP2RefSeq:NP_181381.2
SMART:SM00774SMR:B3DNP2STRING:3702.AT2G38470.1SUPFAM:0050605SUPFAM:SSF118290TAIR:AT2G38470tair10-symbols:ATWRKY33
tair10-symbols:WRKY33UniGene:At.13123UniGene:At.48567UniProt:B3DNP2UniProt:Q8S8P5
Coordinates (TAIR10) chr2:+:16108476..16110539
Molecular Weight (calculated) 57181.70 Da
IEP (calculated) 7.89
GRAVY (calculated) -1.03
Length 519 amino acids
Sequence (TAIR10)
(BLAST)
001: MAASFLTMDN SRTRQNMNGS ANWSQQSGRT STSSLEDLEI PKFRSFAPSS ISISPSLVSP STCFSPSLFL DSPAFVSSSA NVLASPTTGA LITNVTNQKG
101: INEGDKSNNN NFNLFDFSFH TQSSGVSAPT TTTTTTTTTT TTNSSIFQSQ EQQKKNQSEQ WSQTETRPNN QAVSYNGREQ RKGEDGYNWR KYGQKQVKGS
201: ENPRSYYKCT FPNCPTKKKV ERSLEGQITE IVYKGSHNHP KPQSTRRSSS SSSTFHSAVY NASLDHNRQA SSDQPNSNNS FHQSDSFGMQ QEDNTTSDSV
301: GDDEFEQGSS IVSRDEEDCG SEPEAKRWKG DNETNGGNGG GSKTVREPRI VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTI GCPVRKHVER
401: ASHDMRAVIT TYEGKHNHDV PAARGSGYAT NRAPQDSSSV PIRPAAIAGH SNYTTSSQAP YTLQMLHNNN TNTGPFGYAM NNNNNNSNLQ TQQNFVGGGF
501: SRAKEEPNEE TSFFDSFMP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)