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AT2G38465.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.486
cytosol 0.484
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J4SJeggNOG:ENOG410ZC11EMBL:AC004683EMBL:AK220642EMBL:AY084994EMBL:CP002685EnsemblPlants:AT2G38465
EnsemblPlants:AT2G38465.1entrez:818428GeneID:818428GO:GO:0005886Gramene:AT2G38465.1HOGENOM:HOG000241993KEGG:ath:AT2G38465
ncoils:CoilOMA:NCLSMAVPhylomeDB:Q8S8P4Proteomes:UP000006548RefSeq:NP_565890.1STRING:3702.AT2G38465.1TAIR:AT2G38465
UniGene:At.37290UniProt:Q8S8P4
Coordinates (TAIR10) chr2:-:16106393..16106810
Molecular Weight (calculated) 9383.00 Da
IEP (calculated) 8.23
GRAVY (calculated) -0.85
Length 84 amino acids
Sequence (TAIR10)
(BLAST)
1: MQDAETSRQP AKSLSDRVKT NCLSMAVTCQ EGFSYVKAFF VGQTKRLTAK NEKEATEAHL TETKMQVDAT DEAENAKKRL HQSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)