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AT2G38310.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : PYR1-like 4
Curator
Summary (TAIR10)
Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.
Computational
Description (TAIR10)
PYR1-like 4 (PYL4); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G05440.1); Has 467 Blast hits to 463 proteins in 53 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 2; Plants - 445; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
BioGrid:3753DIP:DIP-53474NeggNOG:ENOG410IG1PeggNOG:ENOG4111MYFEMBL:AC004683EMBL:AY039586EMBL:AY054141
EMBL:AY087146EMBL:CP002685EnsemblPlants:AT2G38310EnsemblPlants:AT2G38310.1entrez:818411Gene3D:3.30.530.20GeneID:818411
Genevisible:O80920GO:GO:0004864GO:GO:0004872GO:GO:0005634GO:GO:0005737GO:GO:0005886GO:GO:0009738
GO:GO:0010427GO:GO:0042803GO:GO:0043086GO:GO:0080163Gramene:AT2G38310.1hmmpanther:PTHR31213hmmpanther:PTHR31213:SF3
HOGENOM:HOG000238422InParanoid:O80920IntAct:O80920InterPro:IPR019587InterPro:IPR023393iPTMnet:O80920KEGG:ath:AT2G38310
KO:K14496OMA:VSRYHTHPaxDb:O80920Pfam:O80920Pfam:PF10604PhylomeDB:O80920PIR:T02514
PRIDE:O80920PRO:PR:O80920ProteinModelPortal:O80920Proteomes:UP000006548RefSeq:NP_565887.1SMR:O80920STRING:3702.AT2G38310.1
SUPFAM:SSF55961TAIR:AT2G38310tair10-symbols:PYL4tair10-symbols:RCAR10UniGene:At.12775UniProt:O80920
Coordinates (TAIR10) chr2:+:16050251..16050874
Molecular Weight (calculated) 22436.60 Da
IEP (calculated) 6.94
GRAVY (calculated) -0.11
Length 207 amino acids
Sequence (TAIR10)
(BLAST)
001: MLAVHRPSSA VSDGDSVQIP MMIASFQKRF PSLSRDSTAA RFHTHEVGPN QCCSAVIQEI SAPISTVWSV VRRFDNPQAY KHFLKSCSVI GGDGDNVGSL
101: RQVHVVSGLP AASSTERLDI LDDERHVISF SVVGGDHRLS NYRSVTTLHP SPISGTVVVE SYVVDVPPGN TKEETCDFVD VIVRCNLQSL AKIAENTAAE
201: SKKKMSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)