suba logo
AT2G37750.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
cytosol 0.384
plasma membrane 0.369
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 21 Blast hits to 21 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J7JSeggNOG:ENOG410ZCPFEMBL:AC004684EMBL:AY065348EMBL:AY086849EMBL:AY096719EMBL:CP002685
EnsemblPlants:AT2G37750EnsemblPlants:AT2G37750.1entrez:818352GeneID:818352Gramene:AT2G37750.1hmmpanther:PTHR34670hmmpanther:PTHR34670:SF3
HOGENOM:HOG000077432KEGG:ath:AT2G37750OMA:QIRYGNEPhylomeDB:O80943PIR:T02541Proteomes:UP000006548RefSeq:NP_565870.1
STRING:3702.AT2G37750.1TAIR:AT2G37750UniGene:At.28646UniProt:O80943
Coordinates (TAIR10) chr2:+:15831017..15831265
Molecular Weight (calculated) 8797.25 Da
IEP (calculated) 9.52
GRAVY (calculated) -0.27
Length 82 amino acids
Sequence (TAIR10)
(BLAST)
1: MEGLIPLVYK AVMQIRYGNE SQQLSSSYYV RLPGDSGRFV RSDLDVSGPG SNSSNRASSS TSTTTFAVYA GVQSPVSRQV VT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)