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AT2G37610.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.950
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 21 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JV99eggNOG:ENOG4110649EMBL:AC004684EMBL:CP002685EnsemblPlants:AT2G37610EnsemblPlants:AT2G37610.1entrez:818338
GeneID:818338Gramene:AT2G37610.1hmmpanther:PTHR33142hmmpanther:PTHR33142:SF7HOGENOM:HOG000115146KEGG:ath:AT2G37610OMA:ETEYLAM
PhylomeDB:O80930PIR:T02527Proteomes:UP000006548RefSeq:NP_181297.1TAIR:AT2G37610UniGene:At.53058UniProt:O80930
Coordinates (TAIR10) chr2:-:15776869..15777673
Molecular Weight (calculated) 19129.80 Da
IEP (calculated) 4.59
GRAVY (calculated) -0.75
Length 161 amino acids
Sequence (TAIR10)
(BLAST)
001: MEIGNVKADV NLVLNLREAE RHRRYFDYFI DEILWLSFLG MSETSLKEEE VTLGGVKETR EEECSDDKLV LDICLKRKRL DEEEEEEVVE EENDGFKTPT
101: RPENRIPIVR ECPPAPMKRS SEMFRGRTMY CRRRLSFLPE DDVNSFITDL QWRTTTMTIK K
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)