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AT2G37460.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.678
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nodulin MtN21 /EamA-like transporter family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G37450.2); Has 3094 Blast hits to 3077 proteins in 704 species: Archae - 42; Bacteria - 1467; Metazoa - 3; Fungi - 4; Plants - 1230; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJDVeggNOG:ENOG410YBPNEMBL:AC005896EMBL:AY035102EMBL:AY044320EMBL:AY063035EMBL:AY085629
EMBL:CP002685EnsemblPlants:AT2G37460EnsemblPlants:AT2G37460.1entrez:818323GeneID:818323Genevisible:Q9ZUS1GO:GO:0005886
GO:GO:0006810GO:GO:0016021GO:GO:0022857GO:GO:0055085Gramene:AT2G37460.1hmmpanther:PTHR31218hmmpanther:PTHR31218:SF29
HOGENOM:HOG000237441InParanoid:Q9ZUS1InterPro:IPR000620InterPro:IPR030184KEGG:ath:AT2G37460OMA:GSIMITIPANTHER:PTHR31218
PaxDb:Q9ZUS1Pfam:PF00892Pfam:Q9ZUS1PhylomeDB:Q9ZUS1PIR:A84793PRIDE:Q9ZUS1PRO:PR:Q9ZUS1
ProteinModelPortal:Q9ZUS1Proteomes:UP000006548RefSeq:NP_181282.1SUPFAM:0043518TAIR:AT2G37460TMHMM:TMhelixUniGene:At.19949
UniProt:Q9ZUS1
Coordinates (TAIR10) chr2:-:15726667..15729010
Molecular Weight (calculated) 41533.90 Da
IEP (calculated) 9.21
GRAVY (calculated) 0.53
Length 380 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEVKKRDCM EKARPFISMV VLQVGLAGMD ILSKAVLNKG MSNYVLVVYR HAVATIVMAP FAFYFDKKVR PKMTLMIFFK ISLLGLLEPV IDQNLYYLGM
101: KYTTATFATA MYNVLPAITF VLAYIFGLER VKLRCIRSTG KVVGTLATVG GAMIMTLVKG PVLDLFWTKG VSAHNTAGTD IHSAIKGAVL VTIGCFSYAC
201: FMILQAITLR TYPAELSLTA WICLMGTIEG TAVALVMEKG NPSAWAIGWD TKLLTATYSG IVCSALAYYV GGVVMKTRGP VFVTAFSPLC MIIVAIMSTI
301: IFAEQMYLGR VLGAVVICAG LYLVIWGKGK DYKYNSTLQL DDESAQPKLE LSGNGKDNVD HEVITISKQG EQRRTAVETV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)