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AT2G37440.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.984
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DNAse I-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G01900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-370-MONOMEREC:3.1.3.-eggNOG:COG5411eggNOG:KOG0565
EMBL:AC005896EMBL:AK227745EMBL:CP002685EnsemblPlants:AT2G37440
EnsemblPlants:AT2G37440.1entrez:818321ExpressionAtlas:Q0WT19Gene3D:3.60.10.10
GeneID:818321Genevisible:Q0WT19GO:GO:0016787GO:GO:0046856
hmmpanther:PTHR11200hmmpanther:PTHR11200:SF115HOGENOM:HOG000241161InParanoid:Q0WT19
InterPro:IPR000300InterPro:IPR005135KEGG:ath:AT2G37440OMA:CINESFA
PaxDb:Q0WT19Pfam:PF03372PhylomeDB:Q0WT19PIR:G84792
PRIDE:Q0WT19PRO:PR:Q0WT19ProteinModelPortal:Q0WT19Proteomes:UP000006548
Reactome:R-ATH-1660514Reactome:R-ATH-1855183Reactome:R-ATH-1855204Reactome:R-ATH-194840
RefSeq:NP_181280.3SMART:SM00128SMR:Q0WT19STRING:3702.AT2G37440.1
SUPFAM:SSF56219TAIR:AT2G37440UniGene:At.37422UniProt:Q0WT19
Coordinates (TAIR10) chr2:+:15719230..15721885
Molecular Weight (calculated) 54624.00 Da
IEP (calculated) 9.57
GRAVY (calculated) -0.65
Length 479 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKILKSKSS WPRTVVRKWL NLRSGAYEFH SDYPVKGMEP RRKSCSDMIV PENFQGWLGQ GNGDLKHSTG EQHVTRVDDK LDLKMFVGTW NVGGKSPHEG
101: LDLKDWLKSP ADADIYVLGF QEIVPLNAGN VLGAEDNGPA AKWLSLIREA LNNTNNLSPN ELEHTKSSQQ PRFSFSGLSD DTPIPCNSTP PRGYSLAASK
201: QMVGIFLCVW VRDDLRKRIT NLKVSCVGRG IMGYLGNKGS VSISMSLHET SLCFVCTHLT SGEKEGDELR RNLDVTEIFK RTRFSRSSKD SRPETIMDHD
301: KVIWLGDLNY RLRASSDLHE QLRNHDWESL LEKDQLKIEQ RAGRIFKGWE EGKIYFAPTY KYRINSDNYV VQTEKSKEKR RTPAWCDRIL WKGDGMKQLW
401: YVRGESKFSD HRPVQSLFSV HIDLKNQSNR KTKPVNQNHR PNPVLTYTCH GKVQAEEILL LTRAQSCIDT LPRLISSAS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)