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AT2G37240.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30962257 (2019): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:19334764 (2009): plasma membrane
  • PMID:18431481 (2008): plastid plastid stroma
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Thioredoxin superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G65840.1); Has 368 Blast hits to 368 proteins in 75 species: Archae - 0; Bacteria - 23; Metazoa - 194; Fungi - 17; Plants - 121; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IT70eggNOG:ENOG410XVW9EMBL:AC005896EMBL:AY050345
EMBL:AY088891EMBL:BT006337EMBL:CP002685EnsemblPlants:AT2G37240
EnsemblPlants:AT2G37240.1entrez:818301Gene3D:3.40.30.10GeneID:818301
Genevisible:Q9ZUU2GO:GO:0009507Gramene:AT2G37240.1hmmpanther:PTHR28630
hmmpanther:PTHR28630:SF5HOGENOM:HOG000083460InParanoid:Q9ZUU2InterPro:IPR012336
InterPro:IPR032801KEGG:ath:AT2G37240OMA:QDWKLSFPANTHER:PTHR28630
PaxDb:Q9ZUU2Pfam:PF13911Pfam:Q9ZUU2PhylomeDB:Q9ZUU2
PIR:C84790PRIDE:Q9ZUU2PRO:PR:Q9ZUU2ProteinModelPortal:Q9ZUU2
Proteomes:UP000006548RefSeq:NP_030274.1STRING:3702.AT2G37240.1SUPFAM:SSF52833
TAIR:AT2G37240UniGene:At.13314UniProt:Q9ZUU2
Coordinates (TAIR10) chr2:-:15640235..15641720
Molecular Weight (calculated) 26606.00 Da
IEP (calculated) 8.85
GRAVY (calculated) -0.06
Length 248 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIALSSSST ITSITLQPKL KTIHGLGTVL PGYSVKSHFR SVSLRRSAVV VSAITGASSG AGIGKGTADS LDTVKVLDLR GNEIPISDLW KDRKAVVAFA
101: RHFGCVLCRK RAAYLAEKKD VMDASGVALV LIGPGSIDQA NTFVEQTKFK GEVYADPNHA SYEALEFVSG VSVTFTPKAA MKILESYMEG YRQDWKLSFM
201: KDTVERGGWQ QGGILVAGPG KDNISYIRKD KEAGDDPPVE EILKACCA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)