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AT2G37140.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 0.392
endoplasmic reticulum 0.269
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Terpenoid synthases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Terpenoid synthases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949); BEST Arabidopsis thaliana protein match is: terpene synthase 1 (TAIR:AT4G15870.1); Has 258 Blast hits to 257 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 258; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AC006260EMBL:CP002685EnsemblPlants:AT2G37140EnsemblPlants:AT2G37140.1entrez:818290Gene3D:1.10.600.10GeneID:818290
GO:GO:0000287GO:GO:0010333Gramene:AT2G37140.1hmmpanther:PTHR31045InterPro:IPR005630InterPro:IPR008949KEGG:ath:AT2G37140
Pfam:PF03936PhylomeDB:Q9ZQD0PIR:A84789Proteomes:UP000006548RefSeq:NP_181251.1SMR:Q9ZQD0SUPFAM:SSF48576
TAIR:AT2G37140UniGene:At.53056UniProt:Q9ZQD0
Coordinates (TAIR10) chr2:+:15602863..15603329
Molecular Weight (calculated) 12493.40 Da
IEP (calculated) 9.39
GRAVY (calculated) 0.01
Length 107 amino acids
Sequence (TAIR10)
(BLAST)
001: MIILKLILCM RRWDPNGIYI LPDYMMKTVF SSLLGMFSNR QFKLYSKANL SYAEWAQGDI VPTFDEYLEI GGVEVSMYVT VSCSFLGLVQ TARRKSYEWL
101: KSRRPSQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)