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AT2G37130.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi
  • PMID:21166475 (2011): cytosol
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Peroxidase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: defense response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G21960.1); Has 3882 Blast hits to 3863 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 40; Plants - 3803; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G37130-MONOMERBioCyc:ARA:GQT-999-MONOMEREC:1.11.1.7eggNOG:ENOG410IK1DeggNOG:ENOG410YHIHEMBL:AC006260EMBL:AY059933
EMBL:AY081588EMBL:AY087458EMBL:CP002685EMBL:X98190EMBL:X98317EnsemblPlants:AT2G37130EnsemblPlants:AT2G37130.1
entrez:818289ExpressionAtlas:Q42580GeneID:818289Genevisible:Q42580GO:GO:0004601GO:GO:0005829GO:GO:0006979
GO:GO:0020037GO:GO:0042744GO:GO:0046872GO:GO:0048511GO:GO:0050832hmmpanther:PTHR31235hmmpanther:PTHR31235:SF11
HOGENOM:HOG000237556InParanoid:Q42580IntAct:Q42580InterPro:IPR000823InterPro:IPR002016InterPro:IPR010255KEGG:00940+1.11.1.7
OMA:YLKGRCPPaxDb:Q42580PeroxiBase:240Pfam:PF00141Pfam:Q42580Pfscan:PS50873PhylomeDB:Q42580
PIR:H84788PRIDE:Q42580PRINTS:PR00458PRINTS:PR00461PRO:PR:Q42580PROSITE:PS50873ProteinModelPortal:Q42580
Proteomes:UP000006548RefSeq:NP_181250.1SMR:Q42580STRING:3702.AT2G37130.1SUPFAM:SSF48113TAIR:AT2G37130TMHMM:TMhelix
UniGene:At.21472UniGene:At.47592UniProt:Q42580
Coordinates (TAIR10) chr2:-:15598225..15600004
Molecular Weight (calculated) 36743.20 Da
IEP (calculated) 7.45
GRAVY (calculated) -0.23
Length 327 amino acids
Sequence (TAIR10)
(BLAST)
001: MANAKPFCLL GFFCLLLQLF SIFHIGNGEL EMNYYKESCP KAEEIIRQQV ETLYYKHGNT AVSWLRNLFH DCVVKSCDAS LLLETARGVE SEQKSKRSFG
101: MRNFKYVKII KDALEKECPS TVSCADIVAL SARDGIVMLK GPKIEMIKTG RRDSRGSYLG DVETLIPNHN DSLSSVISTF NSIGIDVEAT VALLGAHSVG
201: RVHCVNLVHR LYPTIDPTLD PSYALYLKKR CPSPTPDPNA VLYSRNDRET PMVVDNMYYK NIMAHKGLLV IDDELATDPR TAPFVAKMAA DNNYFHEQFS
301: RGVRLLSETN PLTGDQGEIR KDCRYVN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)