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AT2G37110.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.678
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : PLAC8 family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT2G40935.1); Has 380 Blast hits to 379 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 19; Plants - 350; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IGFGeggNOG:ENOG410YF4YEMBL:AC006260EMBL:AK226303EMBL:BT024466EMBL:CP002685EnsemblPlants:AT2G37110
EnsemblPlants:AT2G37110.1entrez:818287GeneID:818287Gramene:AT2G37110.1hmmpanther:PTHR15907hmmpanther:PTHR15907:SF58InterPro:IPR006461
KEGG:ath:AT2G37110OMA:AKCCADGPfam:PF04749PIR:F84788Proteomes:UP000006548RefSeq:NP_565858.1STRING:3702.AT2G37110.1
TAIR:AT2G37110TIGRfam:TIGR01571TIGRFAMs:TIGR01571UniGene:At.27780UniProt:Q9ZQC8
Coordinates (TAIR10) chr2:+:15592689..15593726
Molecular Weight (calculated) 26644.50 Da
IEP (calculated) 5.36
GRAVY (calculated) -0.32
Length 242 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGEDSREAQ RGDEYEESSP LLKVNENDGK ICSKRDAKAA PLVPPPAAEE YGWTADGLPV SHGSVIGEPI RRNQWNSGLF TCLGRNDEFC SSDLEVCLLG
101: SVAPCVLYGT NAERLGSAPG TFSNHCLTYL GLYFVGNSLF GWNCLAPWFS YSSRSAIRRK FNLEGSFEAM NRSCGCCGGC IEDEMQREHL ETTCDFVTHV
201: LCHTCALCQE GRELRRKVLH PGFNAQSTVV VMPPIEQTMG RK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)