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AT2G37050.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Predictors External Curations
AmiGO : plasma membrane 14506206
AmiGO : plasma membrane 16618929
AmiGO : plasma membrane 17317660
TAIR : plasma membrane 17317660
TAIR : plasma membrane 14506206
TAIR : plasma membrane 16618929
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G67720.1); Has 171956 Blast hits to 128721 proteins in 4916 species: Archae - 120; Bacteria - 14857; Metazoa - 46912; Fungi - 10709; Plants - 78380; Viruses - 428; Other Eukaryotes - 20550 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:ENOG410IHRUEMBL:CP002685EnsemblPlants:AT2G37050EnsemblPlants:AT2G37050.1entrez:818281ExpressionAtlas:F4IPZ3
Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:818281GO:GO:0004674GO:GO:0005524GO:GO:0016021Gramene:AT2G37050.1
hmmpanther:PTHR27003hmmpanther:PTHR27003:SF23InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR017441InterPro:IPR024788InterPro:IPR025875InterPro:IPR032675ncoils:CoilPaxDb:F4IPZ3Pfam:PF07714
Pfam:PF12799Pfam:PF12819Pfam:PF13855Pfscan:PS50011PRIDE:F4IPZ3PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:F4IPZ3Proteomes:UP000006548RefSeq:NP_181242.3scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:F4IPZ3STRING:3702.AT2G37050.3SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT2G37050TMHMM:TMhelixUniGene:At.13683
UniProt:F4IPZ3
Coordinates (TAIR10) chr2:+:15569290..15573477
Molecular Weight (calculated) 103490.00 Da
IEP (calculated) 6.56
GRAVY (calculated) -0.20
Length 933 amino acids
Sequence (TAIR10)
(BLAST)
001: MVRISLLLLC LLVSTCLFTS SSAQAPGFVS LDCGGAEPFT DELGLKWSPD NHLIYGETAN ISSVNETRTQ YTTLRHFPAD SRKYCYTLNV TSRNRYLIRA
101: TFLYGNFDNS NNVYPKFDIS LGATHWATIV ISETYIIETA ELVFLASSPT VSVCLSNATT GQPFISTLEL RQLSGSMYGS MLSEDRFYLS VAARINFGAE
201: SEASVRYPDD PYDRIWESDL QKKPNYLVDV AAGTVRVSTT LPIESRVDDR PPQKVMQTAV VGTNGSLTYR MNLDGFPGFG WAFTYFAEIE DLAEDESRKF
301: RLVLPEQPEY SKSVVNIKEN TQRPYRVYAP GYPNITLPFV LNFRFAKTAD SSRGPILNAM EISKYLRKSD GSVDATVMAN VASLYSSTEW AQEGGDPCSP
401: SPWSWVQCNS DPQPRVVAIK LSSMNLTGNI PSDLVKLTGL VELWLDGNSF TGPIPDFSRC PNLEIIHLEN NRLTGKIPSS LTKLPNLKEL YLQNNVLTGT
501: IPSDLAKDVI SNFSGNLNLE KSGDKGKKLG VIIGASVGAF VLLIATIISC IVMCKSKKNN KLGKTSELTN RPLPIQRVSS TLSEAHGDAA HCFTLYEIEE
601: ATKKFEKRIG SGGFGIVYYG KTREGKEIAV KVLANNSYQG KREFANEVTL LSRIHHRNLV QFLGYCQEEG KNMLVYEFMH NGTLKEHLYG VVPRDRRISW
701: IKRLEIAEDA ARGIEYLHTG CVPAIIHRDL KTSNILLDKH MRAKVSDFGL SKFAVDGTSH VSSIVRGTVG YLDPEYYISQ QLTEKSDVYS FGVILLELMS
801: GQEAISNESF GVNCRNIVQW AKMHIDNGDI RGIIDPALAE DDYSLQSMWK IAEKALLCVK PHGNMRPSMS EVQKDIQDAI RIEKEALAAR GGISDEFSRS
901: SAHSSSLNMG MLDLAGSQSY VSIDESVLQP TAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)