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AT2G36960.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : TSL-kinase interacting protein 1
Curator
Summary (TAIR10)
Arabidopsis thaliana myb/SANT domain protein
Computational
Description (TAIR10)
TSL-kinase interacting protein 1 (TKI1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39380.1); Has 171 Blast hits to 167 proteins in 60 species: Archae - 0; Bacteria - 20; Metazoa - 45; Fungi - 2; Plants - 87; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Protein Annotations
BioGrid:3614eggNOG:ENOG4111TCZeggNOG:KOG4468EMBL:AC006922EMBL:AF530160EMBL:AY064068EMBL:AY096376
EMBL:CP002685EnsemblPlants:AT2G36960EnsemblPlants:AT2G36960.1entrez:818270ExpressionAtlas:Q8LJT8Gene3D:1.10.10.60GeneID:818270
Genevisible:Q8LJT8GO:GO:0003677GO:GO:0005634GO:GO:0006351GO:GO:0006355hmmpanther:PTHR21677hmmpanther:PTHR21677:SF3
HOGENOM:HOG000239895InParanoid:Q8LJT8IntAct:Q8LJT8InterPro:IPR001005InterPro:IPR009057InterPro:IPR017884PaxDb:Q8LJT8
Pfam:PF00249Pfam:Q8LJT8Pfscan:PS51293PhylomeDB:Q8LJT8PIR:G84786PRIDE:Q8LJT8PRO:PR:Q8LJT8
PROSITE:PS51293ProteinModelPortal:Q8LJT8Proteomes:UP000006548RefSeq:NP_850273.1RefSeq:NP_850274.1SMART:SM00717SMR:Q8LJT8
STRING:3702.AT2G36960.3SUPFAM:SSF46689SwissPalm:Q8LJT8TAIR:AT2G36960tair10-symbols:TKI1UniGene:At.27079UniProt:Q8LJT8
Coordinates (TAIR10) chr2:+:15523552..15527245
Molecular Weight (calculated) 82262.10 Da
IEP (calculated) 6.34
GRAVY (calculated) -0.65
Length 743 amino acids
Sequence (TAIR10)
(BLAST)
001: MLKQFTHYCE MQAELIPEGP NGEGRLSNQN SNPNLLSSAS ISITQFPAKK PTRQWAAWTH QEEESFFTAL RQVGKNFEKI TSRVQSKNKD QVRHYYYRLV
101: RRMNKLLGPD LSLDAKNPKD TNAAMLRWWS LLEKYSCKAS KLHLKPRRFK LFIEALEHQL LKDRRKSIRK RTCQGENLSS ASLGNISSHS RERGLDNRPF
201: KLILSDGQNV KKLGPGRAST KHGESLSVNL GDEKEDTAFG RGGRQRRKQG YRKWEKAAID GVSLVADAAE HLERTSIDKD MDDQTDLGPT RYLTGKSPLS
301: LCSAGDVPLS DANMQFSAKL KLQLFPIDEC TRRSLEMDKH NPHLELTLSN RKKISSVLEH LNRKWGSSSC ATGELLLFPY NARKETVTCH QRWTHDSFLS
401: AAEVHSMVGS PSVFRLRYGW FVHDASGSII SQVPTSDPCP SLEDDMNVDR LNEVNMLLTE SGPLSVHSTA EQTTSVEPSQ GLVCASGVHD RPARSRDDYE
501: PASTSITPLE HLSGGNAQSP GEWADSLTNI SIGDLLSEVP DDIDSDGVDP PATEGSHYLL RDVPFTSDSF DAAIAAHILR HQNKPSAQLP LTSGSSSLWD
601: DEETRDAFSF QKNRFANSTE LASVASPKGV GRVNGEPSQL VEASSGDEGS YNPHDDGDPM EEGPADPHTM DSPGKTPCGL ADVYWPDSLG PLDLDIRSSK
701: YTDDLILSES LGGLSRLIAT SLDAFQNCSL FGFDNKKDKS NMV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)