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AT2G36810.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 0.712
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24486761 (2014): plant-type vacuole
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ARM repeat superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 392 Blast hits to 295 proteins in 82 species: Archae - 0; Bacteria - 2; Metazoa - 305; Fungi - 6; Plants - 46; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
Protein Annotations
BioGrid:3597eggNOG:ENOG410XQE8eggNOG:KOG2032EMBL:AC006282EMBL:AK227220EMBL:BT002534EMBL:BT008796
EMBL:CP002685EnsemblPlants:AT2G36810EnsemblPlants:AT2G36810.1entrez:818253Gene3D:1.25.10.10GeneID:818253Genevisible:F4IP13
GO:GO:0009630GO:GO:0009660GO:GO:0009705GO:GO:0009959Gramene:AT2G36810.1hmmpanther:PTHR23120hmmpanther:PTHR23120:SF20
HOGENOM:HOG000030465InParanoid:F4IP13InterPro:IPR011989InterPro:IPR016024InterPro:IPR032682KEGG:ath:AT2G36810OMA:WPFILKL
PaxDb:F4IP13Pfam:F4IP13Pfam:PF12717PIR:A84785PRIDE:F4IP13PRO:PR:F4IP13ProteinModelPortal:F4IP13
Proteomes:UP000006548RefSeq:NP_181219.4STRING:3702.AT2G36810.1SUPFAM:SSF48371TAIR:AT2G36810UniGene:At.37502UniProt:F4IP13
Coordinates (TAIR10) chr2:-:15425739..15439462
Molecular Weight (calculated) 189434.00 Da
IEP (calculated) 6.24
GRAVY (calculated) 0.08
Length 1716 amino acids
Sequence (TAIR10)
(BLAST)
0001: MASSSLGSSI PAPEAVQLLV SSLADDSSVV REASMASLRD IASLNPLLVL DCCYAVSRGG RRRFGNMAGV FQVMAFSVGA LEKGESDSVF MGKLAKIATA
0101: EIISSKELNA DWQRQASGLL VSIGTHFPDL MMEEIFLHLS GPATAAPAMV QILADFASSD ALQFTPRLKG VLSKVSPILG NVRDIHRPIF ANAFKCWSQA
0201: VWLYITDLTS DSPLDSDVMS FLNSVFELLL RVWAVSRDHK VRVSTVDALG QMVGLITRTQ LKSALPRLIP AILELYKKDH DDALLATCSL HNLLNASLLS
0301: ESGPPLLDFE DLTIVLSTLL PVIGINNERK RFSDISVGRK TYNEVQRCFL TVGLVYPEDL FTFLLNKCKL KEDPLTFGAL CILKHLLPRL FEAWHSKRPL
0401: LVDTASSLLD EQSLAVRKAL SELIVVMASH CYLVGPSGEL FVEYLVRHSA IGESDHLKAK GELVSPTQLR AVCGKGLLLL TVTIPEMELS DFNAKEYMKL
0501: QYILWPFLLK MIIPKVYTGA VASVCRCITE LCRRRSSTTP MLIECKARAD IPNPEELFTR LVVLLHNPLA KEQLASQILT VLGYLSPLFP KNISMFWQDE
0601: IPKMKAYVYD TEDLKLDPTY QETWDDMIIN FLAESLDVTQ DADWVISLGN SFAKQYILYA PDDDHAALLH RCIGILLQKV NDRAYVRDKI DWMYEQADIS
0701: IPANRLGLAK AMGLVAASHL DTVLEKLKII VDNVGQSIFQ RILSLFSESY KTEDSDDIHA ALALMYGYAA KYAPSSVIEA RIDALVGTNM LSRLLHVRQQ
0801: TAKQAVITAI DLLGRAVINA AETGATFPLK RRDQMLDYIL TLMGRDENEG FAESSLEVLH TQALALNACT TLVSVEPKLT IETRNRVMKA TLGFFALPND
0901: PSDVISPLID NLVTLLCAIL LTSGEDGRSR AEQLLHLLRQ LDQYVSSPID YQRKRGCVAV HEMLLKFRKL CVGGYCALGC SGDCPHRKYA DRSMQGNFSN
1001: LPSVFLFPDR EVLCLGDRVI TYLPRCADTN SEVRKISAQI LDQFFSISLS LPKAVLTSGL DSEDSYKALS SLEDVIAILK SDASIDPSEV FNRIVSSICS
1101: LLTEHELVAA LHSCTAAICD KIRQSAEGAI QAVTEFVSRR GSQLSDNDIS RTTHSLLSAA VHITDKNLRV EAIGAISALA ENTQSSIVFN EVLATAGKDI
1201: VTKDITRMRG GWPMQDAFYA FSQHTELSVL FMEHLISILN RSSLVKSDSH KGENTSSSSE THVEDDILQA AIFALTAFFR GGGKIGKKAV EKSYSSVVGA
1301: LTLQLGSCHG LASSGQQDPL RVLLTSFQAF CECVGDLEMG KILARNGEQI EKEKWVGLIG DIAGCISIKR PKEVRHICMI LTKALNRPQR FQREAAAAAL
1401: SEFIRYSGDF SSVMEEMVEA LCRHVSDDSP TVRRLCLRGL VQMPSACMSH YTTQVIGVIL ALLDDLDESV QLTAVSCLLM VTESASNDAV EPILLNLSVR
1501: LRNLQVSMDP KMRANAFSAL GALSKYATGG QREGFVEQIH STLPRLVVHL HDDDPSIRQA CRVTLKRFAP LVDIINYSTL YDSRAFGSED RTDYENFVRD
1601: LSKHLVQESE RVDTYMASTI QAFDAPWPVI QANAIHFSTT MLSLSEDQHI ISLYYPQVFE TLVSKMTRSQ DSVVRAACSS AFGLLLRSSK STLWRGARLD
1701: GTDSGRKAND LESVKK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)