suba logo
AT2G36270.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Basic-leucine zipper (bZIP) transcription factor family protein
Curator
Summary (TAIR10)
Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination. The Arabidopsis abscisic acid (ABA)-insensitive abi5 mutants have pleiotropic defects in ABA response, including decreased sensitivity to ABA inhibition of germination and altered expression of some ABA-regulated genes. Comparison of seed and ABA-inducible vegetative gene expression in wild-type and abi5-1 plants indicates that ABI5 regulates a subset of late embryogenesis-abundant genes during both developmental stages.
Computational
Description (TAIR10)
ABA INSENSITIVE 5 (ABI5); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.1); Has 3780 Blast hits to 3404 proteins in 335 species: Archae - 4; Bacteria - 363; Metazoa - 820; Fungi - 233; Plants - 1594; Viruses - 12; Other Eukaryotes - 754 (source: NCBI BLink).
Protein Annotations
BioGrid:3543DIP:DIP-40551NeggNOG:ENOG410IHGDeggNOG:ENOG4110YI4EMBL:AC006921EMBL:AF334206EMBL:BT026517
EMBL:CP002685EnsemblPlants:AT2G36270EnsemblPlants:AT2G36270.1entrez:818199GeneID:818199Genevisible:Q9SJN0GO:GO:0003700
GO:GO:0005634GO:GO:0006351GO:GO:0006355GO:GO:0009414GO:GO:0009651GO:GO:0009737GO:GO:0009738
GO:GO:0009739GO:GO:0009845GO:GO:0010182GO:GO:0010187GO:GO:0010200GO:GO:0043565GO:GO:0045893
GO:GO:0048316Gramene:AT2G36270.1hmmpanther:PTHR22952hmmpanther:PTHR22952:SF217HOGENOM:HOG000237278InParanoid:Q9SJN0IntAct:Q9SJN0
InterPro:IPR004827InterPro:IPR029803KEGG:ath:AT2G36270KO:K14432ncoils:CoilOMA:HSVPANHPANTHER:PTHR22952:SF217
PaxDb:Q9SJN0Pfam:PF00170Pfam:Q9SJN0Pfscan:PS50217PhylomeDB:Q9SJN0PIR:G84778PRIDE:Q9SJN0
PRO:PR:Q9SJN0PROSITE:PS00036PROSITE:PS50217ProteinModelPortal:Q9SJN0Proteomes:UP000006548RefSeq:NP_565840.1scanprosite:PS00036
SMART:SM00338SMR:Q9SJN0STRING:3702.AT2G36270.1SUPFAM:SSF57959TAIR:AT2G36270tair10-symbols:ABI5tair10-symbols:GIA1
UniGene:At.14114UniProt:Q9SJN0
Coordinates (TAIR10) chr2:-:15204980..15206571
Molecular Weight (calculated) 47009.60 Da
IEP (calculated) 9.31
GRAVY (calculated) -0.84
Length 442 amino acids
Sequence (TAIR10)
(BLAST)
001: MVTRETKLTS EREVESSMAQ ARHNGGGGGE NHPFTSLGRQ SSIYSLTLDE FQHALCENGK NFGSMNMDEF LVSIWNAEEN NNNQQQAAAA AGSHSVPANH
101: NGFNNNNNNG GEGGVGVFSG GSRGNEDANN KRGIANESSL PRQGSLTLPA PLCRKTVDEV WSEIHRGGGS GNGGDSNGRS SSSNGQNNAQ NGGETAARQP
201: TFGEMTLEDF LVKAGVVREH PTNPKPNPNP NQNQNPSSVI PAAAQQQLYG VFQGTGDPSF PGQAMGVGDP SGYAKRTGGG GYQQAPPVQA GVCYGGGVGF
301: GAGGQQMGMV GPLSPVSSDG LGHGQVDNIG GQYGVDMGGL RGRKRVVDGP VEKVVERRQR RMIKNRESAA RSRARKQAYT VELEAELNQL KEENAQLKHA
401: LAELERKRKQ QYFESLKSRA QPKLPKSNGR LRTLMRNPSC PL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)