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AT2G36220.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.966
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52710.1); Has 74 Blast hits to 74 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IXBAeggNOG:ENOG410YUY6EMBL:AC006921EMBL:AY053408
EMBL:AY074832EMBL:CP002685EnsemblPlants:AT2G36220EnsemblPlants:AT2G36220.1
entrez:818194GeneID:818194GO:GO:0009061Gramene:AT2G36220.1
hmmpanther:PTHR34120hmmpanther:PTHR34120:SF2KEGG:ath:AT2G36220OMA:VSARETH
PhylomeDB:Q9SJN3PIR:B84778Proteomes:UP000006548RefSeq:NP_565838.1
STRING:3702.AT2G36220.1TAIR:AT2G36220UniGene:At.20166UniGene:At.66347
UniProt:Q9SJN3
Coordinates (TAIR10) chr2:+:15192556..15193347
Molecular Weight (calculated) 29037.50 Da
IEP (calculated) 10.72
GRAVY (calculated) -0.67
Length 263 amino acids
Sequence (TAIR10)
(BLAST)
001: MPQVDIEAFV SSVCIGGSDH RKIVCETLAD DSTIPPYYNN SAVSPSDFPP ESYFLSNDAQ LEWLSDNAFF DRKDSQKGNS GILNSNPNSN PSSQRFLLKS
101: KASIIGLPKP QKTCFNEAKQ RRHAGKNRVI LKRVGSRIKT DISLLEPSSP KVSCIGRVRS RRERSRRMHR QKSSRVEPVN RVKKPGFMAS FRAIFRIKGG
201: CKDVSARETH TSTRNTHDIR SRLPAEADEK SVFDGGEPVV PGLGGMTRFA SGRRADLLGG GGC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)