AT2G35650.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.975 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cellulose synthase like | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
a member of Glycosyltransferase- Family 2 and encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein. Mutants exhibit defects in pollen tube growth and embryo development. The defective embryonic development was associated with reduced proliferation and failed cellularization of the endosperm. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cellulose synthase like (CSLA07); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT5G03760.1); Has 5575 Blast hits to 5571 proteins in 1570 species: Archae - 229; Bacteria - 4378; Metazoa - 38; Fungi - 87; Plants - 496; Viruses - 11; Other Eukaryotes - 336 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:14985625..14988187 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 63798.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.01 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.26 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 556 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSPLPIFHRL PHATFSSFLL SLSQAGSSKT SVAFLNAFKS EDIIARIGLW WQLIRAVVVV PVFKFLVLLC LVMSVMFFVE VMYMGIVVLY VKLFKRKPEK 101: FYKWEAMEDD VECGSASYPM VLVQIPMYNE KEVCEQSIAA ACKISWPSNR IIIQVLDDST DPASKELVKK ECDRWSKEGV NITFEIRDNR NGYKAGALRE 201: GMRHSYVKQC DYVAIFDADF QPDPDFLHRT VPFLIHNPKL ALVQGRWEFV NAGQCMMTRL QEMSLSYHFT IEQQVGSSTF AFFGFNGTAG VWRISALNES 301: GGWNDQTTVE DMDLAVRATL RGWKFLYIDD LKVKSELPCS FKALRSQQHR WTCGPANLLR KMAGQIIRSE NVSLWKKWYM LYSFFFMRKI VAHILTFCFY 401: CVILPATVLF PEVTVPKWAA FYLPSLITLL IAIGRLRSIH LLAFWVLFEN AMSLLRAKAL VMGLFETGRV QEWVVTEKLG DTLKTKLIPQ VPNVRFRERV 501: HLLELLVGAY LLFCGIYDIV YGKNTLYVYL LFQSVAFFVV GFGFVGKYVP ASSYLA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)