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AT2G35635.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.599
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24361574 (2014): plastid plastid stroma
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ubiquitin 7
Curator
Summary (TAIR10)
encodes a ubiquitin-like protein that contains tandem repeats of the ubiquitin coding region, but at least one repeat per gene encodes a protein with amino acid substitutions.
Computational
Description (TAIR10)
ubiquitin 7 (UBQ7); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: related to ubiquitin 1 (TAIR:AT1G31340.1); Has 16104 Blast hits to 7343 proteins in 724 species: Archae - 0; Bacteria - 35; Metazoa - 7305; Fungi - 1873; Plants - 3622; Viruses - 336; Other Eukaryotes - 2933 (source: NCBI BLink).
Protein Annotations
BioGrid:3477eggNOG:COG5272eggNOG:KOG0001EMBL:AC006068EMBL:AK118678EMBL:AY074850EMBL:AY093802
EMBL:CP002685EnsemblPlants:AT2G35635EnsemblPlants:AT2G35635.1entrez:818132GeneID:818132Genevisible:Q8RUC6GO:GO:0005634
GO:GO:0005737GO:GO:0006511Gramene:AT2G35635.1hmmpanther:PTHR10666InParanoid:Q8RUC6InterPro:IPR000626InterPro:IPR019954
InterPro:IPR019956InterPro:IPR029071KEGG:ath:AT2G35635KO:K12158OMA:YRIKERVPaxDb:Q8RUC6Pfam:PF00240
Pfam:Q8RUC6Pfscan:PS50053PIR:S55242PRIDE:Q8RUC6PRINTS:PR00348PRO:PR:Q8RUC6PROSITE:PS00299
PROSITE:PS50053ProteinModelPortal:Q8RUC6Proteomes:UP000006548Reactome:R-ATH-110312Reactome:R-ATH-110314Reactome:R-ATH-110320Reactome:R-ATH-156827
Reactome:R-ATH-174184Reactome:R-ATH-179409Reactome:R-ATH-1799339Reactome:R-ATH-349425Reactome:R-ATH-450302Reactome:R-ATH-450321Reactome:R-ATH-5358346
Reactome:R-ATH-5632684Reactome:R-ATH-5655862Reactome:R-ATH-5656121Reactome:R-ATH-5656169Reactome:R-ATH-5696394Reactome:R-ATH-5696395Reactome:R-ATH-5696397
Reactome:R-ATH-5696400Reactome:R-ATH-6781823Reactome:R-ATH-6782135Reactome:R-ATH-6782210Reactome:R-ATH-68949Reactome:R-ATH-69017Reactome:R-ATH-72689
Reactome:R-ATH-72695Reactome:R-ATH-72702Reactome:R-ATH-72706Reactome:R-ATH-917729Reactome:R-ATH-975956Reactome:R-ATH-975957Reactome:R-ATH-983168
RefSeq:NP_565812.1scanprosite:PS00299SMART:SM00213SMR:Q8RUC6STRING:3702.AT2G35635.1SUPFAM:SSF54236TAIR:AT2G35635
tair10-symbols:RUB2tair10-symbols:UBQ7UniGene:At.37643UniProt:Q8RUC6
Coordinates (TAIR10) chr2:+:14981044..14981943
Molecular Weight (calculated) 17150.90 Da
IEP (calculated) 5.85
GRAVY (calculated) -0.35
Length 154 amino acids
Sequence (TAIR10)
(BLAST)
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPTDTID
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYAIEGG SVLHLVLALR GGLL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)