suba logo
AT2G35630.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
golgi 0.569
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31818904 (2020): mitochondrion
  • PMID:30961429 (2019): nucleus
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:22550958 (2012): plastid
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ARM repeat superfamily protein
Curator
Summary (TAIR10)
Member of the MAP215 family of microtubule-associated proteins required to establish interphase arrays of cortical microtubules.Mutants have defects in cytokinesis during pollen development. Vegetative phenotypes observed in temperature sensitive mutants include left-handed organ twisting, isotropic cell expansion and impairment of root hair polarity.
Computational
Description (TAIR10)
MICROTUBULE ORGANIZATION 1 (MOR1); CONTAINS InterPro DOMAIN/s: HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28155.1); Has 1070 Blast hits to 718 proteins in 196 species: Archae - 0; Bacteria - 4; Metazoa - 490; Fungi - 304; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XPTWeggNOG:KOG1820EMBL:AC006068EMBL:AF367246
EMBL:AK221769EMBL:AY124770EMBL:CP002685EnsemblPlants:AT2G35630
EnsemblPlants:AT2G35630.1entrez:818131Gene3D:1.25.10.10GeneID:818131
Genevisible:Q94FN2GO:GO:0000911GO:GO:0005819GO:GO:0005874
GO:GO:0008017GO:GO:0009506GO:GO:0009524GO:GO:0009574
GO:GO:0009920GO:GO:0030981Gramene:AT2G35630.1hmmpanther:PTHR12609
hmmpanther:PTHR12609:SF0HOGENOM:HOG000030138InParanoid:Q94FN2InterPro:IPR011989
InterPro:IPR016024InterPro:IPR021133InterPro:IPR024395iPTMnet:Q94FN2
KEGG:ath:AT2G35630KO:K16803ncoils:CoilOMA:ITEFGFQ
PaxDb:Q94FN2Pfam:PF12348Pfam:Q94FN2Pfscan:PS50077
PhylomeDB:Q94FN2PIR:A84771PRIDE:Q94FN2PRO:PR:Q94FN2
PROSITE:PS50077ProteinModelPortal:Q94FN2Proteomes:UP000006548RefSeq:NP_565811.2
SMR:Q94FN2STRING:3702.AT2G35630.1SUPFAM:SSF48371TAIR:AT2G35630
tair10-symbols:GEM1tair10-symbols:MOR1UniGene:At.26127UniProt:Q94FN2
Coordinates (TAIR10) chr2:+:14966828..14980361
Molecular Weight (calculated) 217562.00 Da
IEP (calculated) 7.63
GRAVY (calculated) -0.24
Length 1978 amino acids
Sequence (TAIR10)
(BLAST)
0001: MSTEDEKLLK EAKKLPWEDR LGHKNWKVRN EANVDLASVF DSITDPKDPR LRDFGHLFRK TVADSNAPVQ EKALDALIAF LRAADSDAGR YAKEVCDAIA
0101: LKCLTGRKNT VDKAQAAFLL WVELEAVDVF LDTMEKAIKN KVAKAVVPAV DVMFQALSEF GSKVIPPKRI LKMLPELFDH QDQNVRASAK GVTLELCRWI
0201: GKDPVKSILF EKMRDTMKKE LEAELANVTA GAKPTRKIRS EQDKEPEAEA SSDVVGDGPS EEAVADAPQE IDEYDLMDPV DILTPLEKSG FWDGVKATKW
0301: SERKEAVAEL TKLASTKKIA PGDFSEICRT LKKLITDVNL AVAVEAIQAI GNLACGLRTH FSASSRFMLP VLLEKLKEKK QSVTDPLTQT LQTMYKAGCL
0401: NLVDVIEDVK TAVKNKVPLV RSSTLTWLTF CLETSNKALI LKAHKEYVPL CMECLNDGTP DVRDAAFSAL AAIAKSVGMR PLERSLEKLD DVRKKKLSEM
0501: IAGSGGGDQA GTSSVTVQSS VGSTATGNSD ASFVRKSAAS MLSGKRPAPS AQASKKVGTG KPGGGKKDGS VRNEGSKSVE PPEDVEPAEM GLEEIENRLG
0601: SLVKPETVSQ LKSSVWKERL EATLALKEEI EGLQELDKSV EILVRLLCAV PGWNEKNVQV QQQVIEIITY ISSTAAKFPK KCVVLCITGT SERVADIKTR
0701: ASAMKCLTAF CEAVGPGFVF ERLFKIMKEH KNPKVLSEGL LWMVSAVDDF GVSLLKLKDL IDFCKDVGLQ SSTAATRNAT IKLLGALHKF VGPDIKGFLN
0801: DVKPALLSAL DTEYEKNPFE GTAAPKRVVK TSVSTSTSSG GLDSLPREDI STKITPNLLK GFESPDWKMR LESIEAVNKI LEEANKRIQP TGTGELFGGL
0901: RGRLLDSNKN LVMQTLTTIG GVAAAMGPAV EKASKGILSD VLKCLGDNKK HMRECTLAAL DLWLGAVHLD KMIPYIIIAL TDGKMGAEGR KDLFDWLTKQ
1001: LTGLSDFVDA IHLLKPASTA MTDKSADVRK AAEGCISEIL RVSGQEMIEK NLKDIQGPAL ALVLEKVRPG FVQEPFESSK AMAGPVSKGV TKISKSTSNG
1101: TLKQGNRSRA VPTKGSSQIT SVHDIAIQSQ ALLNTKDSNK EDRERVVVRR IKFEELRPEQ IQDLENDMMK FFREDLQKRL LSPDFKKQVD GLEILQKALP
1201: SVSKEIIEVL DVLLRWFVLQ FCKSNTTCLL KVLEFLPELF NTLRDEEYCM TEAEAAIFLP CLAEKLGHNI EKVREKMREL MKQIIQAYSV GKTYPYILEG
1301: LRSKNNRTRI ECTDLIGYLL ETCGTEIGGL LKYLNIVASL TAERDGELRK AALNTMATGY QILGADIWKY VGKLTDAQKS MIDDRFKWKA KDMEKRREGK
1401: PGEARAALRR SVRDSGPEVA EQSGDISQTV PGPLFPRQSY GISEQMLERT PVPRTIAGVN GPTDWNEALD IIMFGSPEQS VEGMKVVCHE LAQASNDPEE
1501: SAIDELVKDA DGLVSCLANK VAKTFDVSLM GASSRSCKYV LNTLMQTFQN KKLAHAVKEG TLESLITELL LWLLDERVPR MEDGSQLLKA LNVLMLKILD
1601: NADRTSSFVV LISLLRPLDP SRWPSPATAE VYAVRNQKFS DLVVKCLIKL TKLLQSTIYE VDLDRLLQSI HVYLQDLGME EIRRRAGADD KPLRMVKTVL
1701: HELVKLRGAA IKGHLSLVPI DMRPQPIILA YIDLNLETLA AARMLTATGP VGQTHWTDST ANNPSPPANS ADVQLKQELG AIFKKIGDKQ TSTIGLYDLY
1801: HITKSYPKVD IFSQLQNASE AFRTYIRDGL AQVEKNAAAG RTPSSLPLST PPPSSLALPS PDIPSLSSLD VKPLMNPRSD LYTDDIRASN MNPGVMTGTL
1901: DAIRERMKNM QLASSEPVSK PLMPTNDNLS MNQQSVPPSQ MGQETVHTHP VVLPMDEKAL SGLQARMERL KGGSLEHM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)