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AT2G35510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : similar to RCD one 1
Curator
Summary (TAIR10)
Encodes a WWE domain-containing protein with 76% similarity to RCD1. The protein also contains a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.
Computational
Description (TAIR10)
similar to RCD one 1 (SRO1); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WWE domain (InterPro:IPR004170), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: WWE protein-protein interaction domain protein family (TAIR:AT1G32230.3); Has 207 Blast hits to 202 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Protein Annotations
BioGrid:3462eggNOG:ENOG410IHK4eggNOG:ENOG410YCU9EMBL:AC005314
EMBL:AY056136EMBL:AY150402EMBL:CP002685EnsemblPlants:AT2G35510
EnsemblPlants:AT2G35510.1entrez:818116Gene3D:3.90.228.10GeneID:818116
Genevisible:O82289GO:GO:0003950GO:GO:0006970GO:GO:0006979
GO:GO:0009651GO:GO:0009793GO:GO:0010102GO:GO:0016363
GO:GO:0048573Gramene:AT2G35510.1hmmpanther:PTHR32263hmmpanther:PTHR32263:SF4
HOGENOM:HOG000240570InParanoid:O82289IntAct:O82289InterPro:IPR004170
InterPro:IPR012317InterPro:IPR022003iPTMnet:O82289KEGG:ath:AT2G35510
OMA:DFGNGDHPaxDb:O82289Pfam:O82289Pfam:PF00644
Pfam:PF12174Pfscan:PS50918Pfscan:PS51059PhylomeDB:O82289
PIR:E84769PRO:PR:O82289PROSITE:PS50918PROSITE:PS51059
ProteinModelPortal:O82289Proteomes:UP000006548RefSeq:NP_565806.1STRING:3702.AT2G35510.1
SUPFAM:SSF56399TAIR:AT2G35510tair10-symbols:SRO1UniGene:At.26378
UniProt:O82289
Coordinates (TAIR10) chr2:-:14916898..14919198
Molecular Weight (calculated) 64140.80 Da
IEP (calculated) 6.43
GRAVY (calculated) -0.61
Length 568 amino acids
Sequence (TAIR10)
(BLAST)
001: MEAKIVKVSD SSYKDGLGKK RKHPGNYTPY DSGRSYAKLQ WVLSPNSSTQ KLEKRRNLDG ENKVIVSENH VEKSLVRYFS YYKKTGVPKR VMFHENGEWI
101: DLPDHILCDI RNDLEAKRAT IEFNWCGRHF LLDFLHMYRL DLETGVKTQL AWIDIAGKCF FPETFDTLER DGCHHIRGED PEQHDQREIK LHIEIDVNSG
201: ELPRLNLNVV TDESGDNMDD FQAVQRSSNG PNDEASEDSC SRELDDAVEK WDKTETDRFS GVKPAEEELD KDAVKQMFAL GAATLGHVES LDVYQFSSEI
301: AKARLSLFQK QADITKKHRG DANIRYAWVP AKKEVLSAVM MHGLGVGGAF IKKSMYGVGV HAANCPYFSA RYCDIDDNGV RHMVLCRVIM GNMEPLRGDN
401: TQYFTGGEEY DNGVDDVESP KHYLIWNMNM NTHIYPEFVV SFKLSIPNAE GNILPTTQSR HESSGLTLEG PKGSPSNEPG RVSNGGSGSE KNSSSSRRPR
501: SPIMPFPLLF KAISSKIARK DMDLIIAGYQ ELREKKVSRK EFYKTLSMIV GDDDLLISTI TGLQRSLG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)