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AT2G35470.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 25 Blast hits to 25 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2U4eggNOG:ENOG41119RREMBL:AC005314EMBL:AK176030
EMBL:BT025764EMBL:CP002685EnsemblPlants:AT2G35470EnsemblPlants:AT2G35470.1
entrez:818112GeneID:818112GO:GO:0016021Gramene:AT2G35470.1
hmmpanther:PTHR35297hmmpanther:PTHR35297:SF2HOGENOM:HOG000115168IntAct:O82293
KEGG:ath:AT2G35470OMA:KLVHFIPPhylomeDB:O82293PIR:A84769
Proteomes:UP000006548RefSeq:NP_565804.1TAIR:AT2G35470TMHMM:TMhelix
UniGene:At.43650UniProt:O82293
Coordinates (TAIR10) chr2:-:14909014..14909720
Molecular Weight (calculated) 18886.00 Da
IEP (calculated) 7.72
GRAVY (calculated) -0.66
Length 167 amino acids
Sequence (TAIR10)
(BLAST)
001: MQRISLDSSA SKLHSYGGRK DDTYDIDDLK PASSSPSSSS SAVDYDDHEL KDFKPRRLSS LQSPFVTTNQ KQEKLVHFIP ILTLICFIIL YLTSYAPSQS
101: DLAQFNGFMR PSKHLESSDE NGDEISGFIR ADTLSIRSSV RNLQETESFT TKSLPRRRTS HRKTADF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)