AT2G35390.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 0.571 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Phosphoribosyltransferase family protein | ||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 11485 Blast hits to 11226 proteins in 2803 species: Archae - 263; Bacteria - 6160; Metazoa - 635; Fungi - 723; Plants - 204; Viruses - 13; Other Eukaryotes - 3487 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:14895528..14897098 | ||||||||||||||||
| Molecular Weight (calculated) | 38274.30 Da | ||||||||||||||||
| IEP (calculated) | 6.51 | ||||||||||||||||
| GRAVY (calculated) | 0.07 | ||||||||||||||||
| Length | 352 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPESLNVGNG NPSIPIINER TLPKFLESAR MEKSVNRTNT RLKLFSGTAN PALAQEIAWY MGLDLGKVNI KRFADGEIYV QLQESVRGCD VYLVQPTCTP 101: TNENLMELLI MVDACRRASA KKVTAVIPYF GYARADRKTQ GRESIAAKLV ANLITEAGAD RVLACDLHSG QSMGYFDIPV DHVYCQPVIL DYLASKSIPS 201: EDLVVVSPDV GGVARARAFA KKLSDAPLAI VDKRRSGHNV AEVMNLIGDV RGKVAIMVDD MIDTAGTIVK GAALLHQEGA REVYACCTHA VFSPPAIERL 301: SGGLLQEVIV TNTLPVAEKN YFPQLTILSV ANLLGETIWR VHDDSSVSSI FL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)