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AT2G35390.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.979
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphoribosyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 11485 Blast hits to 11226 proteins in 2803 species: Archae - 263; Bacteria - 6160; Metazoa - 635; Fungi - 723; Plants - 204; Viruses - 13; Other Eukaryotes - 3487 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT2G35390EnsemblPlants:AT2G35390.1entrez:818106gramene_pathway:2.7.6.1gramene_pathway:PWY0-662hmmpanther:PTHR10210hmmpanther:PTHR10210:SF54
KEGG:00030+2.7.6.1KEGG:00230+2.7.6.1Pfam:PF13793Pfam:PF14572scanprosite:PS00114TIGRfam:TIGR01251unipathway:UPA00087
Coordinates (TAIR10) chr2:-:14895528..14897098
Molecular Weight (calculated) 38274.30 Da
IEP (calculated) 6.51
GRAVY (calculated) 0.07
Length 352 amino acids
Sequence (TAIR10)
(BLAST)
001: MPESLNVGNG NPSIPIINER TLPKFLESAR MEKSVNRTNT RLKLFSGTAN PALAQEIAWY MGLDLGKVNI KRFADGEIYV QLQESVRGCD VYLVQPTCTP
101: TNENLMELLI MVDACRRASA KKVTAVIPYF GYARADRKTQ GRESIAAKLV ANLITEAGAD RVLACDLHSG QSMGYFDIPV DHVYCQPVIL DYLASKSIPS
201: EDLVVVSPDV GGVARARAFA KKLSDAPLAI VDKRRSGHNV AEVMNLIGDV RGKVAIMVDD MIDTAGTIVK GAALLHQEGA REVYACCTHA VFSPPAIERL
301: SGGLLQEVIV TNTLPVAEKN YFPQLTILSV ANLLGETIWR VHDDSSVSSI FL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)