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AT2G35370.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : glycine decarboxylase complex H
Curator
Summary (TAIR10)
Encodes glycine decarboxylase complex H protein. Involved in photorespiration.
Computational
Description (TAIR10)
glycine decarboxylase complex H (GDCH); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity; INVOLVED IN: glycine decarboxylation via glycine cleavage system, photorespiration; LOCATED IN: thylakoid, mitochondrion, nucleus, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930), Glycine cleavage H-protein, subgroup (InterPro:IPR017453); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT1G32470.1); Has 7139 Blast hits to 7139 proteins in 2207 species: Archae - 168; Bacteria - 4552; Metazoa - 189; Fungi - 126; Plants - 207; Viruses - 0; Other Eukaryotes - 1897 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G35370-MONOMERBioCyc:MetaCyc:AT2G35370-MONOMERBioGrid:3450BRENDA:1.4.4.2eggNOG:COG0509eggNOG:KOG3373EMBL:AC005314
EMBL:AK228462EMBL:AY050446EMBL:AY058854EMBL:AY086345EMBL:AY097349EMBL:CP002685EMBL:M82921
EMBL:U27144EnsemblPlants:AT2G35370EnsemblPlants:AT2G35370.1entrez:818104GeneID:818104Genevisible:P25855GO:GO:0005634
GO:GO:0005739GO:GO:0005960GO:GO:0009507GO:GO:0009579GO:GO:0019464Gramene:AT2G35370.1gramene_pathway:1.4.4.2
gramene_pathway:GLYCLEAV-PWYHAMAP:MF_00272hmmpanther:PTHR11715hmmpanther:PTHR11715:SF1HOGENOM:HOG000239392IntAct:P25855InterPro:IPR000089
InterPro:IPR002930InterPro:IPR003016InterPro:IPR011053InterPro:IPR017453KEGG:ath:AT2G35370KO:K02437OMA:CKIKLSS
PANTHER:PTHR11715PaxDb:P25855Pfam:P25855Pfam:PF01597Pfscan:PS50968PhylomeDB:P25855PIR:G84767
PRIDE:P25855PRO:PR:P25855PROSITE:PS00189PROSITE:PS50968ProteinModelPortal:P25855Proteomes:UP000006548Reactome:R-ATH-389661
Reactome:R-ATH-6783984RefSeq:NP_181080.1scanprosite:PS00189SMR:P25855STRING:3702.AT2G35370.1SUPFAM:SSF51230TAIR:AT2G35370
tair10-symbols:GDCHTIGRfam:TIGR00527TIGRFAMs:TIGR00527UniGene:At.24936UniProt:P25855
Coordinates (TAIR10) chr2:+:14891239..14892050
Molecular Weight (calculated) 17948.10 Da
IEP (calculated) 5.05
GRAVY (calculated) -0.25
Length 165 amino acids
Sequence (TAIR10)
(BLAST)
001: MALRMWASST ANALKLSSSV SKSHLSPFSF SRCFSTVLEG LKYANSHEWV KHEGSVATIG ITAHAQDHLG EVVFVELPED NTSVSKEKSF GAVESVKATS
101: EILSPISGEI IEVNKKLTES PGLINSSPYE DGWMIKVKPS SPAELESLMG PKEYTKFCEE EDAAH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)