AT2G35170.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.448 golgi 0.366 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Histone H3 K4-specific methyltransferase SET7/9 family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Histone H3 K4-specific methyltransferase SET7/9 family protein; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409); BEST Arabidopsis thaliana protein match is: Histone H3 K4-specific methyltransferase SET7/9 family protein (TAIR:AT4G17080.1); Has 27308 Blast hits to 6490 proteins in 565 species: Archae - 0; Bacteria - 4017; Metazoa - 4394; Fungi - 189; Plants - 2649; Viruses - 0; Other Eukaryotes - 16059 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:14827615..14829605 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54780.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.07 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.48 | ||||||||||||||||||||||||||||||||||||
| Length | 484 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MHLKKSSVTE RRLIGKDDSD PNQIPNPIHH HHQTQNKNRT AIDNKGSGFT KYNHPQGQNH HHTVDIPTGV DHFRRRSARA RSGSISSFFP SNLLSSLSSY 101: RPVIARFLRK LLRYTLRARL ICFHLRFLLL LAVPPLYIFF LVINLRIFLR LVFVIIALSF ILSISLRFAL PHLTSIRLFV ARLLTFIPAR FSSSQPSTDR 201: VVWSIGSKPV AENNKTNSGS WVQKYGTNDM YEGEFHRGKC SGSGVYYYSM KGKYEGEWID GKYDGYGVET WSKGSRYRGQ YRLGLRHGIG VYTFYTGDVY 301: AGEWSNGQCH GCGVYTSEDG SRYDGEFKWG VKHGLGSYHF RNGDAYAGEY FADKMHGFGV YHFANGHKYE GAWHEGRRQG LGMYTFRNGD TQAGHWEDGV 401: LSCPTEQTIR PGSSFTISHS KVVDAVEQAR KAAEKAHEVV KVEERIKRAV MAANRAANAA RVAAVKAVQS QTFHRNDGDL ETNC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)