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AT2G35150.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : EXORDIUM like 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
EXORDIUM like 1 (EXL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 5 (TAIR:AT2G17230.1); Has 396 Blast hits to 396 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IHE2eggNOG:ENOG410YG55EMBL:AC004667EMBL:AK229621EMBL:BT006160EMBL:BT008526EMBL:CP002685
EnsemblPlants:AT2G35150EnsemblPlants:AT2G35150.1entrez:818081GeneID:818081Genevisible:O82176GO:GO:0005615GO:GO:0048046
Gramene:AT2G35150.1hmmpanther:PTHR31279hmmpanther:PTHR31279:SF4HOGENOM:HOG000239502InterPro:IPR006766KEGG:ath:AT2G35150OMA:IWYGRWN
PaxDb:O82176Pfam:O82176Pfam:PF04674PhylomeDB:O82176PIR:C84765PRO:PR:O82176Proteomes:UP000006548
RefSeq:NP_565797.1STRING:3702.AT2G35150.1TAIR:AT2G35150tair10-symbols:EXL1UniGene:At.37700UniProt:O82176
Coordinates (TAIR10) chr2:-:14817220..14818191
Molecular Weight (calculated) 36027.70 Da
IEP (calculated) 6.62
GRAVY (calculated) -0.12
Length 323 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLIIVFFFF SLLLTSNGQF FDESKNYEGS SDLVDLQYHL GPVISSPVTS LYIIWYGRWN PTHQSIIRDF LYSVSAPAPA QYPSVSNWWK TVRLYRDQTG
101: SNITDTLVLS GEFHDSTYSH GSHLTRFSVQ SVIRTALTSK LPLNAVNGLY LVLTSDDVEM QEFCRAICGF HYFTFPSVVG ATVPYAWVGN SERQCPEMCA
201: YPFAQPKPFP GSGFVAREKM KPPNGEVGID GMISVIAHEL AEVSSNPMLN GWYGGEDATA PTEIADLCLG VYGSGGGGGY MGSVYKDRWR NVYNVKGVKG
301: RKYLIQWVWD LNRNRCFGPN AMN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)