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AT2G35120.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Single hybrid motif superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Single hybrid motif superfamily protein; FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, glycine cleavage complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930), Glycine cleavage H-protein, subgroup (InterPro:IPR017453); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT1G32470.1); Has 7147 Blast hits to 7147 proteins in 2201 species: Archae - 168; Bacteria - 4552; Metazoa - 187; Fungi - 130; Plants - 205; Viruses - 0; Other Eukaryotes - 1905 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G35120-MONOMERBioCyc:MetaCyc:MONOMER-907eggNOG:COG0509eggNOG:KOG3373EMBL:AC004667EMBL:AK227751EMBL:AY056106
EMBL:AY060493EMBL:CP002685EnsemblPlants:AT2G35120EnsemblPlants:AT2G35120.1entrez:818078GeneID:818078Genevisible:O82179
GO:GO:0005524GO:GO:0005739GO:GO:0005960GO:GO:0019464Gramene:AT2G35120.1gramene_pathway:1.4.4.2gramene_pathway:GLYCLEAV-PWY
HAMAP:MF_00272hmmpanther:PTHR11715hmmpanther:PTHR11715:SF9HOGENOM:HOG000239392InterPro:IPR000089InterPro:IPR002930InterPro:IPR003016
InterPro:IPR011053InterPro:IPR017453KEGG:ath:AT2G35120KO:K02437OMA:HEWVELVPANTHER:PTHR11715PaxDb:O82179
Pfam:O82179Pfam:PF01597Pfscan:PS50968PhylomeDB:O82179PIR:H84764PRIDE:O82179PRO:PR:O82179
PROSITE:PS00189PROSITE:PS50968ProteinModelPortal:O82179Proteomes:UP000006548Reactome:R-ATH-389661Reactome:R-ATH-6783984RefSeq:NP_181057.1
scanprosite:PS00189SMR:O82179STRING:3702.AT2G35120.1SUPFAM:SSF51230TAIR:AT2G35120TIGRfam:TIGR00527TIGRFAMs:TIGR00527
UniGene:At.12721UniProt:O82179
Coordinates (TAIR10) chr2:-:14805913..14807274
Molecular Weight (calculated) 17100.90 Da
IEP (calculated) 4.75
GRAVY (calculated) -0.35
Length 156 amino acids
Sequence (TAIR10)
(BLAST)
001: MACRLFWASR VASHLRISVA QRGFSSVVLK DLKYADSHEW VKIDGNKATF GITDHAQDHL GDVVYVELPD VGHSVSQGKS FGAVESVKAT SDINSPVSGK
101: VVEVNEELTE SPGLVNSSPY EQGWIIKVEL SDAGEAEKLM DSDKYSKFCE EEDAKH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)