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AT2G35010.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:23444301 (2013): mitochondrion
  • PMID:23444301 (2013): mitochondrion mitochondrial matrix
  • PMID:22923678 (2012): mitochondrion
  • PMID:21472856 (2011): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : thioredoxin O1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
thioredoxin O1 (TO1); INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin O2 (TAIR:AT1G31020.1); Has 13800 Blast hits to 13766 proteins in 2821 species: Archae - 178; Bacteria - 7899; Metazoa - 1073; Fungi - 652; Plants - 1267; Viruses - 5; Other Eukaryotes - 2726 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0526eggNOG:KOG0907EMBL:AC004238EMBL:AK119076EMBL:BT025773EMBL:CP002685EnsemblPlants:AT2G35010
EnsemblPlants:AT2G35010.1EnsemblPlants:AT2G35010.2entrez:818065Gene3D:3.40.30.10GeneID:818065Genevisible:O64764GO:GO:0000103
GO:GO:0005739GO:GO:0005759GO:GO:0006457GO:GO:0006662GO:GO:0015035GO:GO:0016671GO:GO:0034599
GO:GO:0045454Gramene:AT2G35010.1Gramene:AT2G35010.2hmmpanther:PTHR10438hmmpanther:PTHR10438:SF275HOGENOM:HOG000292977InParanoid:O64764
InterPro:IPR005746InterPro:IPR012336InterPro:IPR013766KEGG:ath:AT2G35010KO:K03671OMA:GNWSIVRPANTHER:PTHR10438
PaxDb:O64764Pfam:O64764Pfam:PF00085Pfscan:PS51352PhylomeDB:O64764PIR:T00482PRIDE:O64764
PRO:PR:O64764PROSITE:PS51352ProteinModelPortal:O64764Proteomes:UP000006548RefSeq:NP_001078006.1RefSeq:NP_181046.1SMR:O64764
STRING:3702.AT2G35010.1SUPFAM:SSF52833SwissPalm:O64764TAIR:AT2G35010tair10-symbols:ATO1tair10-symbols:TO1UniGene:At.37724
UniProt:O64764
Coordinates (TAIR10) chr2:+:14754398..14755888
Molecular Weight (calculated) 21192.40 Da
IEP (calculated) 9.92
GRAVY (calculated) -0.10
Length 194 amino acids
Sequence (TAIR10)
(BLAST)
001: MKGNWSIVRK VLHRQFSTLR SSTPSSRLST SIRPLVLAPN SISSLIARNS LFTASNIGPS IDFNFSNTSL PHRRSLCSEA GGENGVVLVK SEEEFINAMS
101: KAQDGSLPSV FYFTAAWCGP CRFISPVIVE LSKQYPDVTT YKVDIDEGGI SNTISKLNIT AVPTLHFFKG GSKKGEVVGA DVTKLKNLME QLYK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)