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AT2G34850.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.990
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
maternal effect embryo arrest 25 (MEE25); FUNCTIONS IN: coenzyme binding, UDP-glucose 4-epimerase activity, catalytic activity; INVOLVED IN: nucleotide-sugar metabolic process, pollen tube development, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), UDP-glucose 4-epimerase (InterPro:IPR005886); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G30620.2); Has 20484 Blast hits to 20484 proteins in 2781 species: Archae - 515; Bacteria - 13175; Metazoa - 415; Fungi - 214; Plants - 690; Viruses - 18; Other Eukaryotes - 5457 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT2G34850EnsemblPlants:AT2G34850.1entrez:818050gramene_pathway:5.1.3.5gramene_pathway:PWY-63gramene_plant_reactome:1119574gramene_plant_reactome:6875778
hmmpanther:PTHR10366hmmpanther:PTHR10366:SF326Pfam:PF16363tair10-symbols:MEE25
Coordinates (TAIR10) chr2:-:14704792..14705768
Molecular Weight (calculated) 26110.30 Da
IEP (calculated) 8.56
GRAVY (calculated) -0.41
Length 236 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAHGVKTLI YSSTCATYGE PEKMPITEET PQVPINPYGK AKKMAEDIIL DFSKNSIMAV MILRYFNVIG SDPEGRLGEA PRPELSEHGR ISGACFDAAR
101: GIIPGLQIKG TDYKTVDGTC VRDYIDVTDL VDAHVKALEK AKPRKVGIFN VGTGKGSSVK EFVEACKKAT GVDIKVDYLE RRAGDYAEVY SDPRKIKEEL
201: NWTAKHTNLQ ESLKMAWRWQ KLHRSGYGSS SLVSAY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)