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AT2G34590.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Transketolase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Transketolase family protein; FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, zinc ion binding, transketolase activity; INVOLVED IN: pollen tube development; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 14271 Blast hits to 14261 proteins in 2406 species: Archae - 196; Bacteria - 9106; Metazoa - 476; Fungi - 223; Plants - 259; Viruses - 0; Other Eukaryotes - 4011 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G34590-MONOMERBioGrid:3370EC:1.2.4.1eggNOG:COG0022eggNOG:KOG0524EMBL:AC004077EMBL:AF167983
EMBL:AY087792EMBL:BT025968EMBL:CP002685EnsemblPlants:AT2G34590EnsemblPlants:AT2G34590.1entrez:818024Gene3D:3.40.50.920
Gene3D:3.40.50.970GeneID:818024Genevisible:O64688GO:GO:0004739GO:GO:0006096GO:GO:0008270GO:GO:0009507
GO:GO:0009941GO:GO:0048868Gramene:AT2G34590.1hmmpanther:PTHR11624hmmpanther:PTHR11624:SF76HOGENOM:HOG000281450InParanoid:O64688
InterPro:IPR005475InterPro:IPR009014InterPro:IPR029061InterPro:IPR033247InterPro:IPR033248iPTMnet:O64688KEGG:ath:AT2G34590
KO:K00162OMA:HSQCPESPANTHER:PTHR11624PaxDb:O64688Pfam:O64688Pfam:PF02779Pfam:PF02780
PhylomeDB:O64688PIR:E84758PRIDE:O64688PRO:PR:O64688ProteinModelPortal:O64688Proteomes:UP000006548RefSeq:NP_181006.1
SMART:SM00861SMR:O64688STRING:3702.AT2G34590.1SUPFAM:SSF52518SUPFAM:SSF52922TAIR:AT2G34590UniGene:At.11693
UniProt:O64688
Coordinates (TAIR10) chr2:-:14568956..14570844
Molecular Weight (calculated) 44017.90 Da
IEP (calculated) 5.61
GRAVY (calculated) -0.06
Length 406 amino acids
Sequence (TAIR10)
(BLAST)
001: MSAILQGAGA ATALSPFNSI DSNKLVAPSR SSLSVRSKRY IVAGSDSKSF GSSLVARRSE PLIPNAVTTK ADTAASSTSS KPGHELLLFE ALQEGLEEEM
101: DRDPHVCVMG EDVGHYGGSY KVTKGLADKF GDLRVLDTPI CENAFTGMGI GAAMTGLRPV IEGMNMGFLL LAFNQISNNC GMLHYTSGGQ FTIPVVIRGP
201: GGVGRQLGAE HSQRLESYFQ SIPGIQMVAC STPYNAKGLM KAAIRSENPV ILFEHVLLYN LKESIPDEEY ICNLEEAEMV RPGEHITILT YSRMRYHVMQ
301: AAKTLVNKGY DPEVIDIRSL KPFDLYTIGN SVKKTHRVLI VEECMRTGGI GASLTAAINE NFHDYLDAPV MCLSSQDVPT PYAGTLEEWT VVQPAQIVTA
401: VEQLCQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)