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AT2G34560.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.736
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G80350.1); Has 30441 Blast hits to 28189 proteins in 3119 species: Archae - 1481; Bacteria - 11200; Metazoa - 4743; Fungi - 3442; Plants - 2763; Viruses - 25; Other Eukaryotes - 6787 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-435-MONOMEReggNOG:ENOG410XPN7eggNOG:KOG0738EMBL:AC004077EMBL:AK316909EMBL:AY084858EMBL:BT028911
EMBL:CP002685EnsemblPlants:AT2G34560EnsemblPlants:AT2G34560.1entrez:818020ExpressionAtlas:O64691Gene3D:3.40.50.300GeneID:818020
GO:GO:0005524Gramene:AT2G34560.1hmmpanther:PTHR23074hmmpanther:PTHR23074:SF92HOGENOM:HOG000225146InterPro:IPR003593InterPro:IPR003959
InterPro:IPR027417KEGG:ath:AT2G34560KO:K07767Pfam:PF00004PhylomeDB:O64691PIR:B84758Proteomes:UP000006548
RefSeq:NP_565791.1SMART:SM00382SMR:O64691STRING:3702.AT2G34560.2SUPFAM:SSF52540TAIR:AT2G34560UniGene:At.47485
UniGene:At.61738UniProt:O64691
Coordinates (TAIR10) chr2:+:14560266..14562695
Molecular Weight (calculated) 42875.10 Da
IEP (calculated) 5.54
GRAVY (calculated) -0.50
Length 384 amino acids
Sequence (TAIR10)
(BLAST)
001: MATDEPSQTR WSFLFGRKKL PEEDVSNKDQ PEDGSSNGNN GDVNNNSSPV TNQDGNTALA NGNVIREKPK KSMFPPFESA ETRTLAESLS RDIIRGNPNI
101: KWESIKGLEN AKKLLKEAVV MPIKYPTYFN GLLTPWKGIL LFGPPGTGKT MLAKAVATEC NTTFFNISAS SVVSKWRGDS EKLIRVLFDL ARHHAPSTIF
201: LDEIDAIISQ RGGEGRSEHE ASRRLKTELL IQMDGLQKTN ELVFVLAATN LPWELDAAML RRLEKRILVP LPDPEARRGM FEMLIPSQPG DEPLPHDVLV
301: EKSEGYSGSD IRILCKEAAM QPLRRTLAIL EDREDVVPED ELPKIGPILP EDIDRALSNT RPSAHLHAHL YDKFNDDYGS QILK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)