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AT2G34530.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.876
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34540.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J13DeggNOG:ENOG41116UEEMBL:AY219104EMBL:AY649303
EMBL:CP002685EnsemblPlants:AT2G34530EnsemblPlants:AT2G34530.1entrez:818016
ExpressionAtlas:Q84X05GeneID:818016GO:GO:0016021Gramene:AT2G34530.1
hmmpanther:PTHR36350hmmpanther:PTHR36350:SF1HOGENOM:HOG000131721KEGG:ath:AT2G34530
OMA:GHEAYEIPhylomeDB:Q84X05Proteomes:UP000006548RefSeq:NP_181000.2
TAIR:AT2G34530TMHMM:TMhelixUniGene:At.37793UniProt:Q84X05
Coordinates (TAIR10) chr2:-:14549141..14550217
Molecular Weight (calculated) 32232.80 Da
IEP (calculated) 8.72
GRAVY (calculated) -0.69
Length 282 amino acids
Sequence (TAIR10)
(BLAST)
001: MKTKYGAAVA PVFLLAAAYV AWNYINRGLW RKKDDENGRD TRKSIGKNIS EQRRDGNVKN MGKEASSGRD ERTLSKSVSM GAIRGGKLAL QRLLDLHSYR
101: GDTSSLANAE LEFEALLSKE KPDFGLLQRD IVKMEMSGKE AKGAELLKKA LEKARKEGKG HEAYEIEMLL VEMLIYLGNM EEASKCKCLE DEVITDARRP
201: LYQTIIHYLQ GHPMKQVEET FNRFREIQIG LQWPGSSEEC EIDQVTFDEF KKVMESLKHE IEDGNKRKLK LVKDKTMRDS LH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)