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AT2G34357.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ARM repeat superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Domain of unknown function, NUC173 (InterPro:IPR012978); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G23540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQ3DeggNOG:KOG1248EMBL:CP002685EnsemblPlants:AT2G34357EnsemblPlants:AT2G34357.1entrez:2745580Gene3D:1.25.10.10
GeneID:2745580Gramene:AT2G34357.1hmmpanther:PTHR21576hmmpanther:PTHR21576:SF2InParanoid:F4IHU8InterPro:IPR011989InterPro:IPR012978
InterPro:IPR016024iPTMnet:F4IHU8KEGG:ath:AT2G34357KO:K14794OMA:ANSRENHPaxDb:F4IHU8Pfam:PF08161
PRIDE:F4IHU8ProteinModelPortal:F4IHU8Proteomes:UP000006548RefSeq:NP_973597.1STRING:3702.AT2G34357.1SUPFAM:SSF48371TAIR:AT2G34357
UniGene:At.43025UniProt:F4IHU8
Coordinates (TAIR10) chr2:+:14499236..14505555
Molecular Weight (calculated) 141804.00 Da
IEP (calculated) 8.67
GRAVY (calculated) -0.26
Length 1280 amino acids
Sequence (TAIR10)
(BLAST)
0001: MELLCDDIGT SMCLTPSEPD LPVSEDFGEY MRSRLSQSKR PDHEHLCAVI EELSKTLAED NHRRTPVAYF ACTCRSLDSL FSAHAEPPVD VVQPHIVILS
0101: LVFPKVSAGV LKRDGLALRL VLNVLRLKSA TPECLISGLK CLVHLLTTVE SIMVNEGSDS YNILLNFVTH SDGKVRKLAS SCLRDVLQKS HGTKAWQSVS
0201: GAITEMFQNY LDLAHKSEVG STEGARGAKQ VLYILSTLKE CLALMSKKHI ATLIEGFKVL MILRDPYITR PVIDSLNAVC LNPTSEVPVE ALLEVLSLAA
0301: GLFSGHETSA DAMTFTARLL KVGMTRSFTL NRDLCVVKLP SVFNGLNDII ASEHEEAIFA ATDALKSLIF SCIDESLIRE GVNEIRNSNL NVRKPSPTVI
0401: EKLCATVESL LDYKYHAVWD MAFQVVSAMF DKLGEHSAYF MRNTLQGLSD MQDLPDEGFP YRKQLHECVG SALGAMGPET FLSIVRLNLE ANDLSEVKVW
0501: LFPILKQYTV GGRLSFFTEA IFSMVETMSH KAQKLKLQGL PVASRSVDSL VYSLWALLPS FCNYPVDTVE SFADLGRILC GVLQTQAETH GIICASLNIL
0601: IQQNKEVVEG KEVPTNDASP AMQRATARYD SQHAAANLKV LRLCAPKLLD VLSRIFHECS KDDGGSLQSA IGNLASIAEK KTVSKLLFKT LQELLEATKT
0701: AIAQDESPVS GMDVDNTADK NSSSNLRARL FDLLVSLLPG LDGQEVDTIF SSLKPAMQDS KGLIQKKAYK VLSVILKSSD GFVSKNLEEL LVLMHNICHV
0801: SAKRHKLDCL YFLLAHASRT DDLKERKDIV SSFLPEVILA LKEVNKKTRN RAYDVLVQIG HAYADEENGG DNEKLHGYFD MVVGCLAGEK PQMISAAVKG
0901: VARLTYEFSD LISSAYNLLP STFLLLQRKN KEITKANLGL LKVLVAKSPV EGLHANLKSM VEGLLKWPEG TKNLFKAKVR LLLEMLIKKC GTEAVKSVMP
1001: EEHMKLLTNI RKIKERKEKK YAAGSDISKS QHSKDTSSKV SRWNDTKIFS DVYADSEDSD GDDMDAESHG RSKASSLLKS KASALRSKKS RNQSHLEVDE
1101: SDDEPLDLMD QHKTRLALRS SELRKRKADS DEEAEFDVEG RLVIREGERS KRKELSDADS DAKSSKGSRF SGNSSKKNQK RMKTSESGYA YTGKEYASKK
1201: ASGDLKKKDK LEPYAYWPLD RKMMSRRPEQ RAVAVRGMSS VVKMAKKMEG KSAAEALATT KFKKFKRSGQ KKSAGKKKNK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)