suba logo
AT2G34060.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Peroxidase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: root hair specific 19 (TAIR:AT5G67400.1); Has 4452 Blast hits to 4430 proteins in 281 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 117; Plants - 4266; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G34060-MONOMEREC:1.11.1.7eggNOG:ENOG410IHK0eggNOG:ENOG410YCA9EMBL:AC002341EMBL:AY080602EMBL:BT002341
EMBL:CP002685EnsemblPlants:AT2G34060EnsemblPlants:AT2G34060.1entrez:817967GeneID:817967Genevisible:O22959GO:GO:0004601
GO:GO:0005576GO:GO:0006979GO:GO:0020037GO:GO:0042744GO:GO:0046872Gramene:AT2G34060.1hmmpanther:PTHR31235
hmmpanther:PTHR31235:SF56HOGENOM:HOG000237556InParanoid:O22959InterPro:IPR000823InterPro:IPR002016InterPro:IPR010255InterPro:IPR019793
InterPro:IPR019794iPTMnet:O22959KEGG:00940+1.11.1.7KEGG:ath:AT2G34060KO:K00430OMA:PRVERDMPaxDb:O22959
PeroxiBase:100Pfam:O22959Pfam:PF00141Pfscan:PS50873PhylomeDB:O22959PIR:H84751PRIDE:O22959
PRINTS:PR00458PRINTS:PR00461PRO:PR:O22959PROSITE:PS00435PROSITE:PS00436PROSITE:PS50873ProteinModelPortal:O22959
Proteomes:UP000006548RefSeq:NP_180953.1scanprosite:PS00435scanprosite:PS00436SMR:O22959STRING:3702.AT2G34060.1SUPFAM:SSF48113
TAIR:AT2G34060TMHMM:TMhelixUniGene:At.37862UniProt:O22959
Coordinates (TAIR10) chr2:+:14384914..14386530
Molecular Weight (calculated) 38230.40 Da
IEP (calculated) 9.61
GRAVY (calculated) -0.18
Length 346 amino acids
Sequence (TAIR10)
(BLAST)
001: MHVISLSLSS IFFFLFLTST ILISPVQPTT SKPPAPRPHR ELSADYYSKK CPQLETLVGS VTSQRFKEVP ISAPATIRLF FHDCFVEGCD GSILIETKKG
101: SKKLAEREAY ENKELREEGF DSIIKAKALV ESHCPSLVSC SDILAIAARD FIHLAGGPYY QVKKGRWDGK RSTAKNVPPN IPRSNSTVDQ LIKLFASKGL
201: TVEELVVLSG SHTIGFAHCK NFLGRLYDYK GTKRPDPSLD QRLLKELRMS CPFSGGSSGV VLPLDATTPF VFDNGYFTGL GTNMGLLGSD QALFLDPRTK
301: PIALEMARDK QKFLKAFGDA MDKMGSIGVK RGKRHGEIRT DCRVFL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)