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AT2G33860.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related
Curator
Summary (TAIR10)
ettin (ett) mutations have pleiotropic effects on Arabidopsis flower development, causing increases in perianth organ number, decreases in stamen number and anther formation, and apical-basal patterning defects in the gynoecium. The ETTIN gene encodes a protein with homology to DNA binding proteins which bind to auxin response elements. ETT transcript is expressed throughout stage 1 floral meristems and subsequently resolves to a complex pattern within petal, stamen and carpel primordia. ETT probably functions to impart regional identity in floral meristems that affects perianth organ number spacing, stamen formation, and regional differentiation in stamens and the gynoecium. During stage 5, ETT expression appears in a ring at the top of the floral meristem before morphological appearance of the gynoecium, consistent with the proposal that ETT is involved in prepatterning apical and basal boundaries in the gynoecium primordium. It is a target of the ta-siRNA tasiR-ARF.
Computational
Description (TAIR10)
ETTIN (ETT); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, vegetative phase change, regulation of transcription, DNA-dependent, abaxial cell fate specification, auxin metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 4 (TAIR:AT5G60450.1); Has 1211 Blast hits to 1200 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 1202; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
BioGrid:3303eggNOG:ENOG410IE2YeggNOG:ENOG410YC80EMBL:AB199791EMBL:AF007788EMBL:AF336917EMBL:AF360313
EMBL:AY056365EMBL:CP002685EMBL:U78721EMBL:U89296EnsemblPlants:AT2G33860EnsemblPlants:AT2G33860.1entrez:817956
Gene3D:2.40.330.10GeneID:817956Genevisible:O23661GO:GO:0003677GO:GO:0003700GO:GO:0005634GO:GO:0006351
GO:GO:0009733GO:GO:0009734GO:GO:0009850GO:GO:0010050GO:GO:0010158GO:GO:0010582Gramene:AT2G33860.1
hmmpanther:PTHR31384hmmpanther:PTHR31384:SF5HOGENOM:HOG000241141InParanoid:O23661IntAct:O23661InterPro:IPR003340InterPro:IPR010525
InterPro:IPR015300iPTMnet:O23661KEGG:ath:AT2G33860KO:K14486OMA:NPKASWSPaxDb:O23661Pfam:O23661
Pfam:PF02362Pfam:PF06507Pfscan:PS50863PhylomeDB:O23661PIR:E84750PIR:T03278PRIDE:O23661
PRO:PR:O23661PROSITE:PS50863ProteinModelPortal:O23661Proteomes:UP000006548RefSeq:NP_180942.1SMART:SM01019SMR:O23661
STRING:3702.AT2G33860.1SUPFAM:SSF101936TAIR:AT2G33860tair10-symbols:ARF3tair10-symbols:ETTUniGene:At.10360UniProt:O23661
Coordinates (TAIR10) chr2:-:14325444..14328613
Molecular Weight (calculated) 66609.20 Da
IEP (calculated) 6.97
GRAVY (calculated) -0.39
Length 608 amino acids
Sequence (TAIR10)
(BLAST)
001: MGGLIDLNVM ETEEDETQTQ TPSSASGSVS PTSSSSASVS VVSSNSAGGG VCLELWHACA GPLISLPKRG SLVLYFPQGH LEQAPDFSAA IYGLPPHVFC
101: RILDVKLHAE TTTDEVYAQV SLLPESEDIE RKVREGIIDV DGGEEDYEVL KRSNTPHMFC KTLTASDTST HGGFSVPRRA AEDCFPPLDY SQPRPSQELL
201: ARDLHGLEWR FRHIYRGQPR RHLLTTGWSA FVNKKKLVSG DAVLFLRGDD GKLRLGVRRA SQIEGTAALS AQYNQNMNHN NFSEVAHAIS THSVFSISYN
301: PKASWSNFII PAPKFLKVVD YPFCIGMRFK ARVESEDASE RRSPGIISGI SDLDPIRWPG SKWRCLLVRW DDIVANGHQQ RVSPWEIEPS GSISNSGSFV
401: TTGPKRSRIG FSSGKPDIPV SEGIRATDFE ESLRFQRVLQ GQEIFPGFIN TCSDGGAGAR RGRFKGTEFG DSYGFHKVLQ GQETVPAYSI TDHRQQHGLS
501: QRNIWCGPFQ NFSTRILPPS VSSSPSSVLL TNSNSPNGRL EDHHGGSGRC RLFGFPLTDE TTAVASATAV PCVEGNSMKG ASAVQSNHHH SQGRDIYAMR
601: DMLLDIAL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)