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AT2G33740.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Nitrogen regulatory PII-like, alpha/beta
Curator
Summary (TAIR10)
encodes a copper binding protein that forms tetramers in vitro. Gene is expressed in all tissues examined and protein is localized to the chloroplast.
Computational
Description (TAIR10)
CUTA; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to metal ion; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Divalent ion tolerance protein, CutA1 (InterPro:IPR004323), Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); Has 2282 Blast hits to 2282 proteins in 877 species: Archae - 133; Bacteria - 1468; Metazoa - 196; Fungi - 4; Plants - 49; Viruses - 0; Other Eukaryotes - 432 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT2G33740EnsemblPlants:AT2G33740.1entrez:817940hmmpanther:PTHR23419hmmpanther:PTHR23419:SF0Pfam:PF03091tair10-symbols:CUTA
Coordinates (TAIR10) chr2:+:14269590..14271326
Molecular Weight (calculated) 16902.30 Da
IEP (calculated) 8.48
GRAVY (calculated) 0.07
Length 156 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSLTTRLS AVIGSRRSFP IVGAFCVLST LSISSLSSSS PFKSGCAQSF SVVPLLRSKF SSKAFSSSIR MEESSKTVPS IVVYVTVPNR EAGKKLANSI
101: VQEKLAACVN IVPGIESVYE WEGKVQSDSE ELLIIKTRQS LLEPLTEHVN ANHEYE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)