AT2G33740.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.991 What is SUBAcon? |
|
||||||||
| Experimental Localisations and PPI |
|
||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||
| Description (TAIR10) | protein_coding : Nitrogen regulatory PII-like, alpha/beta | ||||||||
| Curator Summary (TAIR10) |
encodes a copper binding protein that forms tetramers in vitro. Gene is expressed in all tissues examined and protein is localized to the chloroplast. | ||||||||
| Computational Description (TAIR10) |
CUTA; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to metal ion; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Divalent ion tolerance protein, CutA1 (InterPro:IPR004323), Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); Has 2282 Blast hits to 2282 proteins in 877 species: Archae - 133; Bacteria - 1468; Metazoa - 196; Fungi - 4; Plants - 49; Viruses - 0; Other Eukaryotes - 432 (source: NCBI BLink). | ||||||||
| Protein Annotations |
|
||||||||
| Coordinates (TAIR10) | chr2:+:14269590..14271326 | ||||||||
| Molecular Weight (calculated) | 16902.30 Da | ||||||||
| IEP (calculated) | 8.48 | ||||||||
| GRAVY (calculated) | 0.07 | ||||||||
| Length | 156 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MASSLTTRLS AVIGSRRSFP IVGAFCVLST LSISSLSSSS PFKSGCAQSF SVVPLLRSKF SSKAFSSSIR MEESSKTVPS IVVYVTVPNR EAGKKLANSI 101: VQEKLAACVN IVPGIESVYE WEGKVQSDSE ELLIIKTRQS LLEPLTEHVN ANHEYE |
||||||||
| See Also |
|
||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)