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AT2G33735.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.921
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Chaperone DnaJ-domain superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G16650.1); Has 26 Blast hits to 26 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0484eggNOG:KOG0714EMBL:CP002685EMBL:U78721
EnsemblPlants:AT2G33735EnsemblPlants:AT2G33735.1entrez:817939Gene3D:1.10.287.110
GeneID:817939Gramene:AT2G33735.1hmmpanther:PTHR24078InterPro:IPR001623
InterPro:IPR018253KEGG:ath:AT2G33735OMA:RMRRIYEPfam:PF00226
Pfscan:PS50076PhylomeDB:Q8RYC5PRINTS:PR00625PROSITE:PS00636
PROSITE:PS50076Proteomes:UP000006548RefSeq:NP_565770.1scanprosite:PS00636
SMART:SM00271SMR:Q8RYC5STRING:3702.AT2G33735.1SUPFAM:SSF46565
TAIR:AT2G33735UniGene:At.37890UniProt:Q8RYC5
Coordinates (TAIR10) chr2:-:14268532..14269394
Molecular Weight (calculated) 14439.70 Da
IEP (calculated) 4.72
GRAVY (calculated) -0.86
Length 119 amino acids
Sequence (TAIR10)
(BLAST)
001: MWCSDWGDSH GFDFFDFEDY KDHYKVLELN CDASDDEIRS SFIRLALKWH PDKFKEEDSA TSRFQEINEA YQVLSDPIAR QEYDKKRMRR IYEHNTELLN
101: EYKELILTCN GLGVKHYLW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)