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AT2G33430.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : differentiation and greening-like 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
differentiation and greening-like 1 (DAL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: plastid organization, endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT1G32580.1); Has 251 Blast hits to 228 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 251; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IEVEeggNOG:ENOG410YAFMEMBL:AC002332EMBL:AF446351EMBL:AK228465EMBL:AY088637EMBL:AY097425
EMBL:CP002685EMBL:Y14850EMBL:Y14851EMBL:Z86094EnsemblPlants:AT2G33430EnsemblPlants:AT2G33430.1entrez:817907
GeneID:817907Genevisible:O22793GO:GO:0002103GO:GO:0009507GO:GO:0009657Gramene:AT2G33430.1hmmpanther:PTHR31346
hmmpanther:PTHR31346:SF7HOGENOM:HOG000272676IntAct:O22793iPTMnet:O22793KEGG:ath:AT2G33430OMA:VNTIVCKPaxDb:O22793
Pfam:O22793PhylomeDB:O22793PIR:D84745PIR:T52623PRIDE:O22793PRO:PR:O22793Proteomes:UP000006548
RefSeq:NP_180901.1STRING:3702.AT2G33430.1TAIR:AT2G33430tair10-symbols:DALtair10-symbols:DAL1UniGene:At.111UniProt:O22793
Coordinates (TAIR10) chr2:+:14162732..14164729
Molecular Weight (calculated) 24716.20 Da
IEP (calculated) 8.35
GRAVY (calculated) -0.70
Length 219 amino acids
Sequence (TAIR10)
(BLAST)
001: MALPLSGTRH LTRALLSNVT LMAPPRIPSS VHYGGSRLGC STRFFSIRCG ANRSGSTYSP LNSGSNFSDR PPTEMAPLFP GCDYEHWLIV MDKPGGEGAT
101: KQQMIDCYIQ TLAKVVGSEE EAKKRIYNVS CERYLGFGCE IDEETSTKLE GLPGVLFVLP DSYVDPENKD YGAELFVNGE IVQRSPERQR RVEPQPQRAQ
201: DRPRYNDRTR YSRRRENTR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)