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AT2G33390.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J3JPeggNOG:ENOG410ZBDEEMBL:AC002332EMBL:AY080714
EMBL:BT000917EMBL:CP002685EnsemblPlants:AT2G33390EnsemblPlants:AT2G33390.1
entrez:817903GeneID:817903Gramene:AT2G33390.1hmmpanther:PTHR33401
hmmpanther:PTHR33401:SF2HOGENOM:HOG000114074IntAct:O22789KEGG:ath:AT2G33390
OMA:KEANGCEPhylomeDB:O22789PIR:H84744Proteomes:UP000006548
RefSeq:NP_180897.1STRING:3702.AT2G33390.1TAIR:AT2G33390UniGene:At.37932
UniGene:At.75614UniProt:O22789
Coordinates (TAIR10) chr2:+:14151714..14152698
Molecular Weight (calculated) 10849.40 Da
IEP (calculated) 3.89
GRAVY (calculated) -0.82
Length 98 amino acids
Sequence (TAIR10)
(BLAST)
1: MDTGRGEGKE ANGCENKAIV SLNSSEIEDQ IFEEEESESQ CLLPPRKGGM SRSTDKIKRT VQWNDIKGDN LAEVLVYEPS EVSDTEDDDS DSCICTIM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)